STRINGSTRING
Aave_4715 Aave_4715 Aave_4716 Aave_4716 Aave_4717 Aave_4717 Aave_4718 Aave_4718 Aave_4719 Aave_4719
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_4715KEGG: pol:Bpro_4848 protein of unknown function DUF599. (224 aa)
Aave_4716PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: pol:Bpro_4847 protein of unknown function DUF395, YeeE/YedE. (142 aa)
Aave_4717PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: pol:Bpro_4846 protein of unknown function DUF395, YeeE/YedE. (147 aa)
Aave_4718PFAM: regulatory protein, ArsR; KEGG: pol:Bpro_4845 transcriptional regulator, ArsR family. (110 aa)
Aave_4719PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4844 beta-lactamase-like. (308 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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