STRINGSTRING
Aave_3803 Aave_3803 Aave_3804 Aave_3804 Aave_3805 Aave_3805 Aave_3807 Aave_3807 Aave_3808 Aave_3808 Aave_3809 Aave_3809
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_3803TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sru:SRU_2717 putative multidrug resistance protein NorM. (468 aa)
Aave_3804PFAM: AMP-dependent synthetase and ligase; KEGG: bpm:BURPS1710b_A0616 AMP-binding enzyme domain protein. (529 aa)
Aave_3805PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bxe:Bxe_C0421 putative Orn/DAP/Arg decarboxylase. (404 aa)
Aave_3807KEGG: bxe:Bxe_C0419 hypothetical protein. (178 aa)
Aave_3808KEGG: bur:Bcep18194_C7424 hypothetical protein. (339 aa)
Aave_3809PFAM: 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: bxe:Bxe_C0417 hypothetical protein. (326 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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