STRINGSTRING
Aave_2094 Aave_2094 Aave_2308 Aave_2308 Aave_3725 Aave_3725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_2094PFAM: Antibiotic biosynthesis monooxygenase; KEGG: cvi:CV0462 hypothetical protein. (128 aa)
Aave_2308PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dar:Daro_1473 antibiotic biosynthesis monooxygenase. (102 aa)
Aave_3725KEGG: pst:PSPTO_1674 ferric iron reductase protein FhuF. (276 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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