STRINGSTRING
Aave_1021 Aave_1021 Aave_2433 Aave_2433 Aave_2457 Aave_2457 Aave_2464 Aave_2464 Aave_2639 Aave_2639 Aave_3246 Aave_3246 Aave_3856 Aave_3856 Aave_4561 Aave_4561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_1021PFAM: BolA family protein; KEGG: pol:Bpro_0801 BolA-like protein; Belongs to the BolA/IbaG family. (82 aa)
Aave_2433Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: nmu:Nmul_A2075 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (470 aa)
Aave_2457PFAM: glutaredoxin; KEGG: pol:Bpro_2856 glutaredoxin. (213 aa)
Aave_2464TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase. (617 aa)
Aave_2639TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rfr:Rfer_2898 thioredoxin; Belongs to the thioredoxin family. (110 aa)
Aave_3246TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2319 dihydrolipoamide dehydrogenase. (475 aa)
Aave_3856Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (85 aa)
Aave_4561TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pol:Bpro_4628 thioredoxin. (302 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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