STRINGSTRING
Aave_0393 Aave_0393 Aave_0599 Aave_0599 Aave_0995 Aave_0995 Aave_1018 Aave_1018 uppP uppP Aave_2469 Aave_2469 Aave_2552 Aave_2552 Aave_2811 Aave_2811 Aave_4300 Aave_4300 Aave_0057 Aave_0057 Aave_0182 Aave_0182 Aave_0183 Aave_0183
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_0393KEGG: nmu:Nmul_A1189 hypothetical protein. (64 aa)
Aave_0599PFAM: glycosyl transferase, family 2; KEGG: lpn:lpg2478 glycosyltransferase, group 2 family protein (glycan biosynthesis). (343 aa)
Aave_0995KEGG: rfr:Rfer_2918 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase. (797 aa)
Aave_1018KEGG: rfr:Rfer_2940 sulfate transporter/antisigma-factor antagonist STAS. (96 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (274 aa)
Aave_2469PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: rme:Rmet_4835 glycosyl transferase, family 51. (846 aa)
Aave_2552PFAM: beta-lactamase; KEGG: rpa:RPA0362 putative class A beta-lactamase precursor (penicillinase). (300 aa)
Aave_2811PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_1679 protein of unknown function DUF214. (422 aa)
Aave_4300KEGG: rfr:Rfer_3618 hypothetical protein. (386 aa)
Aave_0057KEGG: xac:XAC3588 integral membrane protein. (328 aa)
Aave_0182PFAM: beta-lactamase; KEGG: sal:Sala_0174 beta-lactamase. (327 aa)
Aave_0183PFAM: beta-lactamase; KEGG: gvi:gll0595 probable beta-lactamase. (436 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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