STRINGSTRING
Aave_0595 Aave_0595 coq7 coq7 Aave_1317 Aave_1317 Aave_1374 Aave_1374 Aave_1446 Aave_1446 Aave_1507 Aave_1507 Aave_2415 Aave_2415 Aave_2416 Aave_2416 Aave_3866 Aave_3866 Aave_0863 Aave_0863
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_0595PFAM: Ferritin, Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family. (174 aa)
coq7Putative ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. (205 aa)
Aave_1317PFAM: protein of unknown function DUF455; KEGG: pol:Bpro_3189 protein of unknown function DUF455. (276 aa)
Aave_1374Bacterioferritin; Iron-storage protein. (158 aa)
Aave_1446KEGG: bxe:Bxe_B1169 hypothetical protein. (330 aa)
Aave_1507TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: pae:PA4235 bacterioferritin; Belongs to the bacterioferritin family. (159 aa)
Aave_2415KEGG: eba:ebA6994 hypothetical protein, INTERPRO-suggestion: probable ferritin-like; Belongs to the Dps family. (269 aa)
Aave_2416KEGG: eba:ebA6997 hypothetical protein. (396 aa)
Aave_3866PFAM: Rubrerythrin; Ferritin, Dps family protein; KEGG: reu:Reut_A2901 rubrerythrin:ferritin and Dps. (184 aa)
Aave_0863Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (387 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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