STRINGSTRING
Aave_3732 Aave_3732 Aave_2086 Aave_2086 Aave_1184 Aave_1184 Aave_1051 Aave_1051 Aave_3832 Aave_3832 Aave_3419 Aave_3419
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_3732PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: nmu:Nmul_A1831 beta-ketoacyl synthase. (1535 aa)
Aave_2086PFAM: Patatin; KEGG: xom:XOO_4256 hypothetical protein. (346 aa)
Aave_1184TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: pol:Bpro_3648 malonyl CoA-acyl carrier protein transacylase. (318 aa)
Aave_1051PFAM: Patatin; KEGG: rfr:Rfer_0908 patatin. (345 aa)
Aave_3832PFAM: Patatin; KEGG: rfr:Rfer_3273 patatin. (418 aa)
Aave_3419KEGG: pen:PSEEN1911 hypothetical protein. (379 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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