STRINGSTRING
Aave_2469 Aave_2469 Aave_2727 Aave_2727 Aave_2903 Aave_2903 Aave_2991 Aave_2991 Aave_3237 Aave_3237 Aave_3471 Aave_3471 Aave_3669 Aave_3669 Aave_4113 Aave_4113 Aave_2160 Aave_2160 Aave_2650 Aave_2650 Aave_4203 Aave_4203 Aave_0476 Aave_0476 Aave_0529 Aave_0529 mtgA mtgA Aave_0995 Aave_0995 Aave_1341 Aave_1341 Aave_1729 Aave_1729 Aave_1957 Aave_1957
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_2469PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: rme:Rmet_4835 glycosyl transferase, family 51. (846 aa)
Aave_2727PFAM: Lytic transglycosylase, catalytic; KEGG: mta:Moth_1608 lytic transglycosylase, catalytic. (192 aa)
Aave_2903KEGG: son:SO2973 prophage LambdaSo, lysozyme, putative. (203 aa)
Aave_2991PFAM: Lytic transglycosylase, catalytic; KEGG: rfr:Rfer_2657 lytic transglycosylase, catalytic. (295 aa)
Aave_3237TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rfr:Rfer_0327 lytic murein transglycosylase. (470 aa)
Aave_3471KEGG: psp:PSPPH_4981 hypothetical protein. (218 aa)
Aave_3669PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_0832 lytic transglycosylase, catalytic. (226 aa)
Aave_4113KEGG: son:SO2973 prophage LambdaSo, lysozyme, putative. (203 aa)
Aave_2160TIGRFAM: lytic murein transglycosylase B; KEGG: rfr:Rfer_2545 lytic murein transglycosylase B. (361 aa)
Aave_2650PFAM: Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: pol:Bpro_2278 lytic transglycosylase, catalytic. (514 aa)
Aave_4203PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_0652 lytic transglycosylase, catalytic. (660 aa)
Aave_0476PFAM: Lytic transglycosylase, catalytic; KEGG: rme:Rmet_2520 lytic transglycosylase, catalytic. (256 aa)
Aave_0529PFAM: Lytic transglycosylase, catalytic; KEGG: xac:XAC2256 hypothetical protein. (202 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (244 aa)
Aave_0995KEGG: rfr:Rfer_2918 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase. (797 aa)
Aave_1341PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_3164 lytic transglycosylase, catalytic. (281 aa)
Aave_1729KEGG: yps:YPTB1805 probable endolysin (lysis protein) (lysozyme). (169 aa)
Aave_1957TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; KEGG: rme:Rmet_3529 penicillin-binding protein 1C. (784 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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