STRINGSTRING
dnaA dnaA dinG dinG tauB tauB Aave_0054 Aave_0054 Aave_0111 Aave_0111 Aave_0125 Aave_0125 Aave_0157 Aave_0157 Aave_0162 Aave_0162 Aave_0172 Aave_0172 Aave_0181 Aave_0181 Aave_0185 Aave_0185 Aave_0190 Aave_0190 Aave_0208 Aave_0208 Aave_0230 Aave_0230 Aave_0231 Aave_0231 radA radA Aave_0299 Aave_0299 Aave_0307 Aave_0307 fusA fusA tuf1 tuf1 Aave_0358 Aave_0358 atpA atpA atpD atpD Aave_0376 Aave_0376 Aave_0418 Aave_0418 Aave_0424 Aave_0424 Aave_0463 Aave_0463 Aave_0502 Aave_0502 Aave_0516 Aave_0516 Aave_0524 Aave_0524 Aave_0527 Aave_0527 Aave_0540 Aave_0540 Aave_0566 Aave_0566 Aave_0578 Aave_0578 recG recG Aave_0604 Aave_0604 Aave_0605 Aave_0605 Aave_0635 Aave_0635 Aave_0637 Aave_0637 Aave_0646 Aave_0646 Aave_0675 Aave_0675 Aave_0676 Aave_0676 Aave_0687 Aave_0687 Aave_0724 Aave_0724 Aave_0726 Aave_0726 Aave_0729 Aave_0729 Aave_0765 Aave_0765 Aave_0782 Aave_0782 Aave_0786 Aave_0786 Aave_0788 Aave_0788 Aave_0807 Aave_0807 hslU hslU Aave_0866 Aave_0866 ffh ffh Aave_0872 Aave_0872 Aave_0881 Aave_0881 ychF ychF Aave_0913 Aave_0913 Aave_0916 Aave_0916 Aave_0938 Aave_0938 Aave_0939 Aave_0939 Aave_0955 Aave_0955 engB engB aroK aroK Aave_1012 Aave_1012 Aave_1013 Aave_1013 Aave_1019 Aave_1019 Aave_1063 Aave_1063 Aave_1068 Aave_1068 Aave_1092 Aave_1092 Aave_1132 Aave_1132 Aave_1148 Aave_1148 Aave_1161 Aave_1161 lepA lepA era era Aave_1232 Aave_1232 Aave_1234 Aave_1234 Aave_1240 Aave_1240 clpB clpB Aave_1279 Aave_1279 Aave_1280 Aave_1280 Aave_1281 Aave_1281 Aave_1293 Aave_1293 miaA miaA Aave_1306 Aave_1306 pyrG pyrG Aave_1349 Aave_1349 Aave_1398 Aave_1398 der der hflX hflX purA purA ntrC ntrC lon lon clpX clpX Aave_1473 Aave_1473 Aave_1482 Aave_1482 Aave_1497 Aave_1497 Aave_1538 Aave_1538 Aave_1539 Aave_1539 Aave_1542 Aave_1542 Aave_1543 Aave_1543 cobQ cobQ Aave_1567 Aave_1567 mfd mfd Aave_1616 Aave_1616 Aave_1657 Aave_1657 Aave_1684 Aave_1684 Aave_1699 Aave_1699 Aave_1746 Aave_1746 Aave_1768 Aave_1768 rhlE rhlE Aave_1801 Aave_1801 Aave_1846 Aave_1846 Aave_1873 Aave_1873 Aave_1877 Aave_1877 Aave_1878 Aave_1878 rsgA rsgA Aave_1894 Aave_1894 Aave_1901 Aave_1901 Aave_1916 Aave_1916 Aave_1919 Aave_1919 Aave_1971 Aave_1971 Aave_1995 Aave_1995 modC modC Aave_2032 Aave_2032 mutS mutS Aave_2066 Aave_2066 Aave_2073 Aave_2073 Aave_2123 Aave_2123 Aave_2145 Aave_2145 Aave_2163 Aave_2163 Aave_2190 Aave_2190 Aave_2251 Aave_2251 Aave_2253 Aave_2253 Aave_2264 Aave_2264 Aave_2270 Aave_2270 Aave_2353 Aave_2353 Aave_2377 Aave_2377 Aave_2395 Aave_2395 Aave_2402 Aave_2402 uvrB uvrB Aave_2480 Aave_2480 Aave_2483 Aave_2483 Aave_2512 Aave_2512 metN metN cysA cysA Aave_2556 Aave_2556 adk adk lpxK lpxK ftsH ftsH pstB pstB Aave_2637 Aave_2637 rho rho Aave_2640 Aave_2640 Aave_2641 Aave_2641 dnaX dnaX Aave_2670 Aave_2670 Aave_2676 Aave_2676 Aave_2686 Aave_2686 Aave_2701 Aave_2701 Aave_2716 Aave_2716 Aave_2719 Aave_2719 Aave_2722 Aave_2722 Aave_2734 Aave_2734 Aave_2755 Aave_2755 Aave_2764 Aave_2764 Aave_2783 Aave_2783 Aave_2797 Aave_2797 Aave_2812 Aave_2812 Aave_2833 Aave_2833 smc smc Aave_2848 Aave_2848 Aave_2900 Aave_2900 Aave_2908 Aave_2908 Aave_2930 Aave_2930 Aave_2931 Aave_2931 Aave_2967 Aave_2967 Aave_3019 Aave_3019 Aave_3025 Aave_3025 ssuB ssuB Aave_3056 Aave_3056 Aave_3062 Aave_3062 Aave_3066 Aave_3066 Aave_3143 Aave_3143 Aave_3170 Aave_3170 Aave_3171 Aave_3171 Aave_3185 Aave_3185 Aave_3186 Aave_3186 Aave_3204 Aave_3204 Aave_3234 Aave_3234 Aave_3238 Aave_3238 Aave_3242 Aave_3242 Aave_3245 Aave_3245 Aave_3251 Aave_3251 cmk cmk Aave_3325 Aave_3325 Aave_3355 Aave_3355 Aave_3357 Aave_3357 Aave_3380 Aave_3380 infB infB msbA msbA Aave_3411 Aave_3411 tmk tmk Aave_3426 Aave_3426 Aave_3457 Aave_3457 Aave_3496 Aave_3496 Aave_3497 Aave_3497 ureG ureG Aave_3536 Aave_3536 gmk gmk Aave_3596 Aave_3596 Aave_3602 Aave_3602 Aave_3603 Aave_3603 Aave_3605 Aave_3605 Aave_3616 Aave_3616 Aave_3617 Aave_3617 Aave_3653 Aave_3653 Aave_3667 Aave_3667 obg obg Aave_3680 Aave_3680 coaE coaE Aave_3687 Aave_3687 secA secA lolD lolD Aave_3713 Aave_3713 Aave_3715 Aave_3715 Aave_3718 Aave_3718 Aave_3724 Aave_3724 Aave_3745 Aave_3745 Aave_3817 Aave_3817 Aave_3818 Aave_3818 Aave_3830 Aave_3830 bioD bioD ftsY ftsY Aave_3890 Aave_3890 Aave_3914 Aave_3914 Aave_3952 Aave_3952 Aave_3970 Aave_3970 Aave_3979 Aave_3979 Aave_4004 Aave_4004 Aave_4005 Aave_4005 Aave_4032 Aave_4032 prfC prfC Aave_4070 Aave_4070 Aave_4079 Aave_4079 Aave_4106 Aave_4106 Aave_4110 Aave_4110 Aave_4120 Aave_4120 Aave_4145 Aave_4145 Aave_4160 Aave_4160 Aave_4197 Aave_4197 ruvB ruvB Aave_4241 Aave_4241 Aave_4245 Aave_4245 nodI nodI Aave_4324 Aave_4324 Aave_4341 Aave_4341 Aave_4373 Aave_4373 Aave_4392 Aave_4392 Aave_4414 Aave_4414 priA priA rep rep Aave_4515 Aave_4515 Aave_4546 Aave_4546 hprK hprK Aave_4619 Aave_4619 recA recA uvrA uvrA cysC cysC Aave_4753 Aave_4753 Aave_4754 Aave_4754 Aave_4769 Aave_4769 mnmE mnmE
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (475 aa)
dinGHelicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. (741 aa)
tauBABC transporter-related protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (269 aa)
Aave_0054Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_0076 cobyrinic acid a,c-diamide synthase. (256 aa)
Aave_0111PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rme:Rmet_3186 ABC transporter-related protein. (439 aa)
Aave_0125TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_0035 septum site-determining protein MinD. (271 aa)
Aave_0157PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein. (1078 aa)
Aave_0162PFAM: type III restriction enzyme, res subunit; KEGG: cte:CT0911 type III restriction system endonuclease. (998 aa)
Aave_0172Sigma54 specific transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: xac:XAC0226 two-component system regulatory protein. (458 aa)
Aave_0181KEGG: rfr:Rfer_0459 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. (705 aa)
Aave_0185SMART: DEXDc2; helicase c2; KEGG: pfo:Pfl_2690 DEAD_2. (798 aa)
Aave_0190PFAM: protein of unknown function DUF344; KEGG: pol:Bpro_4050 protein of unknown function DUF344. (295 aa)
Aave_0208PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein; TC 3.A.1.3.-. (245 aa)
Aave_0230Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_2148 helix-turn-helix, fis-type. (459 aa)
Aave_0231Mg chelatase, subunit ChlI; KEGG: rfr:Rfer_0471 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase. (517 aa)
radADNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (459 aa)
Aave_0299Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0403 ABC transporter-related protein; TC 3.A.1.3.-. (252 aa)
Aave_0307PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0231 ABC transporter-related protein. (291 aa)
fusATranslation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (700 aa)
tuf1Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
Aave_0358PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: dar:Daro_1080 ATP-binding region, ATPase-like:histidine kinase A, N-terminal:osmosensitive K+ channel His kinase sensor. (932 aa)
atpAATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (519 aa)
atpDATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (476 aa)
Aave_0376PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: reu:Reut_A1853 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. (1014 aa)
Aave_0418PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_4486 ABC transporter-related protein. (263 aa)
Aave_0424PFAM: ABC transporter-related protein; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: dar:Daro_0045 ABC transporter-related protein. (640 aa)
Aave_0463KEGG: xom:XOO_0085 HrcN protein; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase. (442 aa)
Aave_0502KEGG: xac:XAC2274 hypothetical protein. (978 aa)
Aave_0516KEGG: rfr:Rfer_1225 hypothetical protein. (264 aa)
Aave_0524KEGG: vfi:VFA0037 hypothetical protein. (251 aa)
Aave_0527KEGG: eba:ebA2421 hypothetical protein. (730 aa)
Aave_0540SMART: DEAD-like helicases-like; KEGG: xac:XAC2243 plasmid-related protein. (757 aa)
Aave_0566PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: xac:XAC2205 chromosome partitioning related protein. (294 aa)
Aave_0578PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: dvu:DVU2175 adenine specific DNA methyltransferase, putative. (1609 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (708 aa)
Aave_0604Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3676 ABC transporter-related protein; TC 3.A.1.1.-. (359 aa)
Aave_0605Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0479 ABC transporter-related protein; TC 3.A.1.1.-. (357 aa)
Aave_0635TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pol:Bpro_0395 twitching motility protein. (378 aa)
Aave_0637Pilus retraction ATPase PilT; KEGG: rfr:Rfer_3878 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (347 aa)
Aave_0646PFAM: UvrD/REP helicase; KEGG: rru:Rru_A1536 UvrD/REP helicase. (665 aa)
Aave_0675PFAM: UvrD/REP helicase; KEGG: bfs:BF1103 putative ATP-dependent DNA helicase. (599 aa)
Aave_0676KEGG: bfs:BF1102 conserved hypothetical protein with RecF/RecN/SMC N-terminal domain. (712 aa)
Aave_0687Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rme:Rmet_1486 cobyrinic acid a,c-diamide synthase. (212 aa)
Aave_0724PFAM: TRAG family protein; KEGG: rso:RSc2586 probable plasmid conjugation traG transmembrane protein. (668 aa)
Aave_0726PFAM: type II secretion system protein E; KEGG: rso:RSc2584 probable conjugal transfer protein TrbB. (349 aa)
Aave_0729SMART: AAA ATPase; KEGG: rme:Rmet_1553 ATPase. (816 aa)
Aave_0765KEGG: plu:plu3302 hypothetical protein. (365 aa)
Aave_0782Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3537 ABC transporter-related protein; TC 3.A.1.4.-. (274 aa)
Aave_0786Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0603 ABC transporter-related protein; TC 3.A.1.4.-. (263 aa)
Aave_0788PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: pol:Bpro_2822 peptidoglycan-binding domain 1. (568 aa)
Aave_0807PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: pol:Bpro_1063 cobalamin synthesis protein, P47K. (359 aa)
hslUHeat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (438 aa)
Aave_0866Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1110 two component, sigma54 specific, transcriptional regulator, fis family. (496 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] (459 aa)
Aave_0872Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1117 two component, sigma54 specific, transcriptional regulator, fis family. (471 aa)
Aave_0881Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family. (373 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa)
Aave_0913PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1595 ABC transporter-related protein; Belongs to the ABC transporter superfamily. (354 aa)
Aave_0916KEGG: pol:Bpro_1330 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase. (453 aa)
Aave_0938KEGG: pol:Bpro_2115 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (332 aa)
Aave_0939KEGG: pol:Bpro_2116 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (355 aa)
Aave_0955PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: noc:Noc_1228 ABC transporter, ATPase subunit. (594 aa)
engBGTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (253 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (183 aa)
Aave_1012Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2971 ABC transporter-related protein; TC 3.A.1.3.-. (264 aa)
Aave_1013PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0793 ABC transporter-related protein. (306 aa)
Aave_1019PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0799 ABC transporter-related protein. (343 aa)
Aave_1063PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3. (345 aa)
Aave_1068PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3214 type II secretion system protein E. (613 aa)
Aave_1092PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rme:Rmet_0393 ABC transporter-related protein. (274 aa)
Aave_1132PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1483 ABC transporter-related protein. (504 aa)
Aave_1148PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pol:Bpro_1516 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (489 aa)
Aave_1161TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rso:RSp0251 probable ferrous iron transport B transmembrane protein. (632 aa)
lepAGTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (602 aa)
eraGTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (344 aa)
Aave_1232Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (473 aa)
Aave_1234PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: pol:Bpro_2186 PhoH-like protein. (494 aa)
Aave_1240TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: pol:Bpro_2192 molybdopterin-guanine dinucleotide biosynthesis protein B. (184 aa)
clpBATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (869 aa)
Aave_1279ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3238 ABC transporter-related protein. (612 aa)
Aave_1280Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: reu:Reut_A3371 ABC transporter-related protein; TC 3.A.1.4.-. (277 aa)
Aave_1281PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bte:BTH_I3330 branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-. (237 aa)
Aave_1293PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3214 ABC transporter-related protein. (235 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (350 aa)
Aave_1306PFAM: protein of unknown function UPF0079; KEGG: rfr:Rfer_3302 protein of unknown function UPF0079. (181 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (559 aa)
Aave_1349Conserved hypothetical protein; KEGG: psb:Psyr_1160 similar to uncharacterized protein conserved in bacteria. (266 aa)
Aave_1398KEGG: pst:PSPTO_5113 hypothetical protein. (610 aa)
derSmall GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (447 aa)
hflXGTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (390 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (459 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (549 aa)
lonATP-dependent proteinase; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (808 aa)
clpXATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (421 aa)
Aave_1473PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein. (1209 aa)
Aave_1482PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: xac:XAC4140 ClpB; Belongs to the ClpA/ClpB family. (925 aa)
Aave_1497KEGG: hch:HCH_01361 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter-related protein; SMART: AAA ATPase. (423 aa)
Aave_1538PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pol:Bpro_2785 cobyrinic acid a,c-diamide synthase. (474 aa)
Aave_1539Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (211 aa)
Aave_1542PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2780 ABC transporter-related protein. (266 aa)
Aave_1543cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (189 aa)
cobQAdenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (492 aa)
Aave_1567PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_3579 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (446 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1163 aa)
Aave_1616PFAM: phage Terminase; KEGG: ppu:PP_3881 phage terminase, large subunit, putative. (563 aa)
Aave_1657KEGG: pol:Bpro_0140 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (631 aa)
Aave_1684PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_1199 helicase-like. (835 aa)
Aave_1699KEGG: ret:RHE_CH01093 putative terminase large subunit protein. (539 aa)
Aave_1746PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_1199 helicase-like. (835 aa)
Aave_1768PFAM: phage Terminase; KEGG: bps:BPSL1143 putative phage terminase. (503 aa)
rhlEDEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. (599 aa)
Aave_1801PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2171 ABC transporter-related protein. (553 aa)
Aave_1846KEGG: bpe:BP3115 hypothetical protein. (409 aa)
Aave_1873Recombination protein MgsA; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: bps:BPSL2602 putative ATPase protein. (462 aa)
Aave_1877Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3794 ABC transporter-related protein; TC 3.A.1.4.-. (260 aa)
Aave_1878Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3793 ABC transporter-related protein; TC 3.A.1.4.-. (242 aa)
rsgARibosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (325 aa)
Aave_1894PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_1413 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (619 aa)
Aave_1901Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rso:RS02226 probable sigma-54 interacting response regulator transcription regulator protein. (473 aa)
Aave_1916PFAM: UvrD/REP helicase; KEGG: pol:Bpro_1723 UvrD/REP helicase. (818 aa)
Aave_1919KEGG: pfo:Pfl_0164 hypothetical protein. (349 aa)
Aave_1971PFAM: Chromosomal replication initiator, DnaA; KEGG: pol:Bpro_3564 chromosomal replication initiator, DnaA; Belongs to the DnaA family. (236 aa)
Aave_1995PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pfl:PFL_3416 ABC transporter ATP-binding protein. (532 aa)
modCMolybdate ABC transporter, ATPase subunit; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (369 aa)
Aave_2032ABC-type multidrug transport system ATPase component-like protein; KEGG: rfr:Rfer_3383 ABC transporter-related protein. (253 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (890 aa)
Aave_2066PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: aeh:Mlg_2321 ABC transporter-related protein. (562 aa)
Aave_2073PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: reu:Reut_A1069 ABC transporter-related protein. (276 aa)
Aave_2123TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter-related protein; KEGG: bxe:Bxe_A0918 excinuclease ABC, A subunit. (944 aa)
Aave_2145KEGG: pol:Bpro_3269 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter-related protein; SMART: AAA ATPase. (270 aa)
Aave_2163PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rfr:Rfer_2529 AAA_3 ATPase. (306 aa)
Aave_2190PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0061 ABC transporter-related protein; Belongs to the ABC transporter superfamily. (546 aa)
Aave_2251Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5626 ABC transporter-related protein; TC 3.A.1.2.-. (511 aa)
Aave_2253PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mlo:mll5657 sugar ABC transporter (ATP-binding protein). (505 aa)
Aave_2264Conserved hypothetical protein; KEGG: gvi:glr1927 unknown protein. (385 aa)
Aave_2270GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (322 aa)
Aave_2353KEGG: ret:RHE_CH01093 putative terminase large subunit protein. (527 aa)
Aave_2377KEGG: noc:Noc_0397 ATPase domain protein. (346 aa)
Aave_2395PFAM: Zonular occludens toxin. (478 aa)
Aave_2402PFAM: Zonular occludens toxin; KEGG: ype:YPO2279 putative phage-related membrane protein. (453 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (696 aa)
Aave_2480PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1992 ABC transporter-related protein. (676 aa)
Aave_2483TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pol:Bpro_1995 twitching motility protein. (387 aa)
Aave_2512TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: rfr:Rfer_2804 LAO/AO transport system ATPase. (340 aa)
metNABC transporter-related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (352 aa)
cysASulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (374 aa)
Aave_2556KEGG: pol:Bpro_2399 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. (1341 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (218 aa)
lpxKlipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (347 aa)
ftsHMembrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (641 aa)
pstBPhosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (260 aa)
Aave_2637PFAM: SMC domain protein; KEGG: dar:Daro_1919 SMC protein, N-terminal. (1164 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (420 aa)
Aave_2640KEGG: rfr:Rfer_2897 hypothetical protein. (883 aa)
Aave_2641DNA helicase/exodeoxyribonuclease V, subunit A; PFAM: UvrD/REP helicase; KEGG: pol:Bpro_2265 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1168 aa)
dnaXDNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (701 aa)
Aave_2670KEGG: rfr:Rfer_1225 hypothetical protein. (286 aa)
Aave_2676PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: eba:ebA381 probable chromosome partitioning related protein. (294 aa)
Aave_2686PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: xcv:XCVd0141 DNA helicase. (709 aa)
Aave_2701PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pfl:PFL_4690 hypothetical protein. (788 aa)
Aave_2716PFAM: type II secretion system protein E; KEGG: ttj:TTHA1774 pili retraction protein PilT. (410 aa)
Aave_2719PFAM: type II secretion system protein E; KEGG: pol:Bpro_5246 type II secretion system protein E. (316 aa)
Aave_2722PFAM: type II secretion system protein E; KEGG: bte:BTH_II0772 type II/IV secretion system protein. (502 aa)
Aave_2734KEGG: rfr:Rfer_1225 hypothetical protein. (250 aa)
Aave_2755KEGG: eba:ebA416 hypothetical protein. (964 aa)
Aave_2764KEGG: eba:ebA403 hypothetical protein. (752 aa)
Aave_2783PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rpa:RPA0573 putative ABC transporter (ATP-binding protein). (244 aa)
Aave_2797Gluconate kinase, SKI family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ppu:PP_3416 gluconokinase. (209 aa)
Aave_2812PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1678 ABC transporter-related protein. (227 aa)
Aave_2833PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bxe:Bxe_B1664 putative helicase. (991 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1175 aa)
Aave_2848PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5775 ABC transporter-related protein. (611 aa)
Aave_2900TIGRFAM: phage uncharacterized protein; KEGG: nma:NMA1852 hypothetical protein. (556 aa)
Aave_2908KEGG: dvu:DVU2689 bacteriophage DNA transposition B protein. (250 aa)
Aave_2930Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2574 ABC transporter-related protein; TC 3.A.1.4.-. (231 aa)
Aave_2931Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2575 ABC transporter-related protein; TC 3.A.1.4.-. (264 aa)
Aave_2967PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter-related protein. (259 aa)
Aave_3019PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2425 ABC transporter-related protein. (237 aa)
Aave_3025PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_1304 cobyrinic acid a,c-diamide synthase. (275 aa)
ssuBABC transporter-related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (272 aa)
Aave_3056KEGG: rfr:Rfer_2460 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding. (456 aa)
Aave_3062KEGG: xcv:XCV4428 putative avirulence protein AvrRxo1. (414 aa)
Aave_3066PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_I0514 protein kinase domain protein. (1311 aa)
Aave_3143PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pae:PA3838 probable ATP-binding component of ABC transporter. (264 aa)
Aave_3170Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_5131 ABC transporter-related protein; TC 3.A.1.4.-. (236 aa)
Aave_3171Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_5130 ABC transporter-related protein; TC 3.A.1.4.-. (255 aa)
Aave_3185KEGG: sat:SYN_02907 ATP-dependent endonuclease family protein. (641 aa)
Aave_3186PFAM: UvrD/REP helicase; KEGG: sat:SYN_02908 ATP-dependent DNA helicase. (603 aa)
Aave_3204PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: pol:Bpro_1966 protein of unknown function DUF853, NPT hydrolase putative. (507 aa)
Aave_3234GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bcn:Bcen_3245 GAF modulated sigma54 specific transcriptional regulator, fis family. (699 aa)
Aave_3238KEGG: pol:Bpro_2940 ATPase AAA-2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family. (783 aa)
Aave_3242SMART: helicase c2; DEAD-like helicases-like; KEGG: rfr:Rfer_2316 helicase C2. (740 aa)
Aave_3245PFAM: AFG1-family ATPase; KEGG: pol:Bpro_2621 AFG1-like ATPase. (365 aa)
Aave_3251PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2423 ABC transporter-related protein; Belongs to the ABC transporter superfamily. (570 aa)
cmkCytidylate kinase / 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. (679 aa)
Aave_3325PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: eca:ECA4254 putative iron(III) ABC transporter ATP-binding protein. (257 aa)
Aave_3355PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase. (1007 aa)
Aave_3357PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: psb:Psyr_3137 ATPas. (437 aa)
Aave_3380TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: pol:Bpro_2429 GTP-binding protein TypA. (608 aa)
infBBacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (943 aa)
msbALipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (600 aa)
Aave_3411KEGG: rfr:Rfer_2256 DNA-directed DNA polymerase. (333 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (221 aa)
Aave_3426DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: pol:Bpro_3799 cell divisionFtsK/SpoIIIE. (779 aa)
Aave_3457PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_4843 ABC transporter-related protein. (361 aa)
Aave_3496Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1397 ABC transporter-related protein; TC 3.A.1.4.-. (234 aa)
Aave_3497PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1396 ABC transporter-related protein. (292 aa)
ureGUrease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (229 aa)
Aave_3536PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: nwi:Nwi_2089 AAA ATPase. (336 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (206 aa)
Aave_3596PFAM: Zonular occludens toxin; KEGG: rme:Rmet_4489 zonular occludens toxin. (336 aa)
Aave_3602DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. (557 aa)
Aave_3603Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. (290 aa)
Aave_3605KEGG: pol:Bpro_1298 hypothetical protein. (653 aa)
Aave_3616KEGG: bja:blr3232 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (356 aa)
Aave_3617PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bja:blr3233 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (289 aa)
Aave_3653Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1284 ABC transporter-related protein; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily. (338 aa)
Aave_3667PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4335 putative ATP-dependent protease La. (336 aa)
obgGTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (357 aa)
Aave_3680Type IV-A pilus assembly ATPase PilB; KEGG: rfr:Rfer_2902 type II secretion system protein E; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. (578 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (208 aa)
Aave_3687PFAM: protein of unknown function DUF815; KEGG: pol:Bpro_0830 protein of unknown function DUF815. (290 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (922 aa)
lolDLipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (230 aa)
Aave_3713KEGG: pfl:PFL_2193 hypothetical protein. (1524 aa)
Aave_3715KEGG: psp:PSPPH_A0106 hypothetical conserved protein, putative. (208 aa)
Aave_3718KEGG: psp:PSPPH_A0109 sulfotransferase, putative. (330 aa)
Aave_3724Cyclic peptide transporter; KEGG: pfl:PFL_4091 pyoverdine ABC export system, permease/ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter-related protein; SMART: AAA ATPase. (564 aa)
Aave_3745Hypothetical protein; KEGG: mth:MTH27 adenylate kinase. (195 aa)
Aave_3817PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_C0434 ABC branched chain amino acid family transporter, ATPase subunit; TC 3.A.1.4.-. (228 aa)
Aave_3818PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_C0433 ABC branched chain amino acid family transporter, ATPase subunit; TC 3.A.1.4.-. (249 aa)
Aave_3830Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (363 aa)
bioDDethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (194 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (305 aa)
Aave_3890PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1043 ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily. (354 aa)
Aave_3914PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_1239 cobyrinic acid a,c-diamide synthase. (206 aa)
Aave_3952PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1222 ATPase associated with various cellular activities, AAA_5. (284 aa)
Aave_3970CRISPR-associated helicase, Cas3 family; KEGG: hch:HCH_02813 predicted helicase; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: DEAD-like helicases-like. (792 aa)
Aave_3979ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1417 ABC transporter-related protein. (773 aa)
Aave_4004PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_2391 ABC transporter-related protein. (486 aa)
Aave_4005KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. (630 aa)
Aave_4032KEGG: rso:RS05318 hypothetical protein. (395 aa)
prfCBacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (542 aa)
Aave_4070PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3901 ABC transporter-related protein. (245 aa)
Aave_4079ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3906 ABC transporter-related protein. (590 aa)
Aave_4106KEGG: noc:Noc_0397 ATPase domain protein. (355 aa)
Aave_4110TIGRFAM: phage uncharacterized protein; KEGG: nma:NMA1852 hypothetical protein. (556 aa)
Aave_4120KEGG: dvu:DVU2689 bacteriophage DNA transposition B protein. (250 aa)
Aave_4145PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mca:MCA2549 carbohydrate ABC transporter, ATP-binding protein, putative. (429 aa)
Aave_4160Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (578 aa)
Aave_4197Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits; TC 3.A.1.2.-. (521 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (354 aa)
Aave_4241PFAM: PhoH family protein; KEGG: pol:Bpro_4095 PhoH-like protein. (316 aa)
Aave_4245PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pol:Bpro_0650 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (477 aa)
nodIABC transporter-related protein; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system. (315 aa)
Aave_4324PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: ccr:CC2091 ABC transporter, ATP-binding protein. (248 aa)
Aave_4341Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1969 aa)
Aave_4373PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_4229 ABC transporter-related protein. (629 aa)
Aave_4392Flagellar protein export ATPase FliI; KEGG: rfr:Rfer_0553 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase. (474 aa)
Aave_4414PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: rfr:Rfer_3708 GTP-binding signal recognition particle SRP54, G-domain. (524 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (763 aa)
repUvrD/REP helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (689 aa)
Aave_4515PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mag:amb1858 ABC-type nitrate/sulfonate/bicarbonate transport system. (257 aa)
Aave_4546TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: rfr:Rfer_0760 DNA polymerase III, delta subunit. (348 aa)
hprKHpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). (318 aa)
Aave_4619KEGG: rfr:Rfer_4005 hypothetical protein. (615 aa)
recArecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (354 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1023 aa)
cysCAdenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. (196 aa)
Aave_4753Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5725 ABC transporter-related protein; TC 3.A.1.4.-. (257 aa)
Aave_4754PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2562 ABC branched chain amino acid family transporter, ATPase subunit; TC 3.A.1.4.-. (234 aa)
Aave_4769PFAM: SMC domain protein; KEGG: bpm:BURPS1710b_2543 hypothetical protein. (944 aa)
mnmEtRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (482 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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