STRINGSTRING
Aave_3800 Aave_3800 acpP acpP Aave_4658 Aave_4658 Aave_4216 Aave_4216 Aave_3730 Aave_3730 Aave_3733 Aave_3733 Aave_3732 Aave_3732 Aave_3731 Aave_3731 Aave_3729 Aave_3729
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_3800PFAM: phosphopantetheine-binding; KEGG: bxe:Bxe_C0425 hypothetical protein. (89 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (79 aa)
Aave_4658TIGRFAM: amino acid adenylation domain; thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain; KEGG: bsu:BG11243 probable non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. (1449 aa)
Aave_4216TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase. (568 aa)
Aave_3730TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1829 amino acid adenylation. (2651 aa)
Aave_3733TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1832 amino acid adenylation. (1779 aa)
Aave_3732PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: nmu:Nmul_A1831 beta-ketoacyl synthase. (1535 aa)
Aave_3731TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pen:PSEEN3230 pyoverdine sidechain peptide synthetase. (1130 aa)
Aave_3729TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_1960 non-ribosomal peptide synthase:amino acid adenylation. (1368 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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