(5 nodes) Nuclear cap binding complex, and Phosphorylated adapter RNA export protein network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9UAT1	RNA_GG_bind domain-containing protein. (263 aa)
	A0A2C9UTR8	Nuclear cap-binding protein subunit 2. (254 aa)
	A0A2C9V1L9	C2H2-type domain-containing protein. (744 aa)
	A0A2C9VTG4	MIF4G domain-containing protein. (869 aa)
	A0A2C9W4L8	RNA_GG_bind domain-containing protein. (256 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9UAT1	A0A2C9UTR8	RNA_GG_bind domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.974
A0A2C9UAT1	A0A2C9V1L9	RNA_GG_bind domain-containing protein.	C2H2-type domain-containing protein.	0.840
A0A2C9UAT1	A0A2C9VTG4	RNA_GG_bind domain-containing protein.	MIF4G domain-containing protein.	0.932
A0A2C9UAT1	A0A2C9W4L8	RNA_GG_bind domain-containing protein.	RNA_GG_bind domain-containing protein.	0.901
A0A2C9UTR8	A0A2C9UAT1	Nuclear cap-binding protein subunit 2.	RNA_GG_bind domain-containing protein.	0.974
A0A2C9UTR8	A0A2C9V1L9	Nuclear cap-binding protein subunit 2.	C2H2-type domain-containing protein.	0.986
A0A2C9UTR8	A0A2C9VTG4	Nuclear cap-binding protein subunit 2.	MIF4G domain-containing protein.	0.999
A0A2C9UTR8	A0A2C9W4L8	Nuclear cap-binding protein subunit 2.	RNA_GG_bind domain-containing protein.	0.974
A0A2C9V1L9	A0A2C9UAT1	C2H2-type domain-containing protein.	RNA_GG_bind domain-containing protein.	0.840
A0A2C9V1L9	A0A2C9UTR8	C2H2-type domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.986
A0A2C9V1L9	A0A2C9VTG4	C2H2-type domain-containing protein.	MIF4G domain-containing protein.	0.992
A0A2C9V1L9	A0A2C9W4L8	C2H2-type domain-containing protein.	RNA_GG_bind domain-containing protein.	0.840
A0A2C9VTG4	A0A2C9UAT1	MIF4G domain-containing protein.	RNA_GG_bind domain-containing protein.	0.932
A0A2C9VTG4	A0A2C9UTR8	MIF4G domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.999
A0A2C9VTG4	A0A2C9V1L9	MIF4G domain-containing protein.	C2H2-type domain-containing protein.	0.992
A0A2C9VTG4	A0A2C9W4L8	MIF4G domain-containing protein.	RNA_GG_bind domain-containing protein.	0.932
A0A2C9W4L8	A0A2C9UAT1	RNA_GG_bind domain-containing protein.	RNA_GG_bind domain-containing protein.	0.901
A0A2C9W4L8	A0A2C9UTR8	RNA_GG_bind domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.974
A0A2C9W4L8	A0A2C9V1L9	RNA_GG_bind domain-containing protein.	C2H2-type domain-containing protein.	0.840
A0A2C9W4L8	A0A2C9VTG4	RNA_GG_bind domain-containing protein.	MIF4G domain-containing protein.	0.932