(5 nodes) NMS complex, and Meiotic spindle checkpoint signaling network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251JJM4	Uncharacterized protein. (524 aa)
	A0A2C9U294	Protein kinase domain-containing protein. (750 aa)
	A0A2C9V3W1	Uncharacterized protein. (438 aa)
	A0A2C9VHI3	Uncharacterized protein. (579 aa)
	A0A2C9VRB1	Uncharacterized protein. (296 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251JJM4	A0A2C9U294	Uncharacterized protein.	Protein kinase domain-containing protein.	0.836
A0A251JJM4	A0A2C9V3W1	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A251JJM4	A0A2C9VHI3	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A251JJM4	A0A2C9VRB1	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2C9U294	A0A251JJM4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.836
A0A2C9U294	A0A2C9V3W1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.979
A0A2C9U294	A0A2C9VHI3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.989
A0A2C9U294	A0A2C9VRB1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.852
A0A2C9V3W1	A0A251JJM4	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A2C9V3W1	A0A2C9U294	Uncharacterized protein.	Protein kinase domain-containing protein.	0.979
A0A2C9V3W1	A0A2C9VHI3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2C9V3W1	A0A2C9VRB1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2C9VHI3	A0A251JJM4	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A2C9VHI3	A0A2C9U294	Uncharacterized protein.	Protein kinase domain-containing protein.	0.989
A0A2C9VHI3	A0A2C9V3W1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2C9VHI3	A0A2C9VRB1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2C9VRB1	A0A251JJM4	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2C9VRB1	A0A2C9U294	Uncharacterized protein.	Protein kinase domain-containing protein.	0.852
A0A2C9VRB1	A0A2C9V3W1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2C9VRB1	A0A2C9VHI3	Uncharacterized protein.	Uncharacterized protein.	0.999