(10 nodes) DNA replication factor C complex, and Checkpoint protein Rad17/Rad24 network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251JT29	Checkpoint protein; Belongs to the HUS1 family. (320 aa)
	A0A251KDB2	Uncharacterized protein; Belongs to the rad9 family. (447 aa)
	A0A2C9U2G1	Rep_fac_C domain-containing protein. (252 aa)
	A0A2C9U5A0	AAA domain-containing protein. (1195 aa)
	A0A2C9V8D2	Uncharacterized protein. (650 aa)
	A0A2C9WAM4	AAA domain-containing protein. (335 aa)
	A0A2C9WEG8	ATPase_AAA_core domain-containing protein. (1256 aa)
	A0A2C9WEK2	AAA domain-containing protein. (342 aa)
	A0A2C9WN70	Uncharacterized protein. (789 aa)
	A0A2C9WN82	Uncharacterized protein. (612 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251JT29	A0A251KDB2	Checkpoint protein; Belongs to the HUS1 family.	Uncharacterized protein; Belongs to the rad9 family.	0.992
A0A251JT29	A0A2C9U2G1	Checkpoint protein; Belongs to the HUS1 family.	Rep_fac_C domain-containing protein.	0.994
A0A251JT29	A0A2C9U5A0	Checkpoint protein; Belongs to the HUS1 family.	AAA domain-containing protein.	0.947
A0A251JT29	A0A2C9V8D2	Checkpoint protein; Belongs to the HUS1 family.	Uncharacterized protein.	0.971
A0A251JT29	A0A2C9WAM4	Checkpoint protein; Belongs to the HUS1 family.	AAA domain-containing protein.	0.995
A0A251JT29	A0A2C9WEG8	Checkpoint protein; Belongs to the HUS1 family.	ATPase_AAA_core domain-containing protein.	0.754
A0A251JT29	A0A2C9WEK2	Checkpoint protein; Belongs to the HUS1 family.	AAA domain-containing protein.	0.947
A0A251JT29	A0A2C9WN70	Checkpoint protein; Belongs to the HUS1 family.	Uncharacterized protein.	0.971
A0A251JT29	A0A2C9WN82	Checkpoint protein; Belongs to the HUS1 family.	Uncharacterized protein.	0.996
A0A251KDB2	A0A251JT29	Uncharacterized protein; Belongs to the rad9 family.	Checkpoint protein; Belongs to the HUS1 family.	0.992
A0A251KDB2	A0A2C9U2G1	Uncharacterized protein; Belongs to the rad9 family.	Rep_fac_C domain-containing protein.	0.963
A0A251KDB2	A0A2C9U5A0	Uncharacterized protein; Belongs to the rad9 family.	AAA domain-containing protein.	0.838
A0A251KDB2	A0A2C9V8D2	Uncharacterized protein; Belongs to the rad9 family.	Uncharacterized protein.	0.905
A0A251KDB2	A0A2C9WAM4	Uncharacterized protein; Belongs to the rad9 family.	AAA domain-containing protein.	0.977
A0A251KDB2	A0A2C9WEG8	Uncharacterized protein; Belongs to the rad9 family.	ATPase_AAA_core domain-containing protein.	0.617
A0A251KDB2	A0A2C9WEK2	Uncharacterized protein; Belongs to the rad9 family.	AAA domain-containing protein.	0.838
A0A251KDB2	A0A2C9WN70	Uncharacterized protein; Belongs to the rad9 family.	Uncharacterized protein.	0.905
A0A251KDB2	A0A2C9WN82	Uncharacterized protein; Belongs to the rad9 family.	Uncharacterized protein.	0.982
A0A2C9U2G1	A0A251JT29	Rep_fac_C domain-containing protein.	Checkpoint protein; Belongs to the HUS1 family.	0.994
A0A2C9U2G1	A0A251KDB2	Rep_fac_C domain-containing protein.	Uncharacterized protein; Belongs to the rad9 family.	0.963