(40 nodes) Nuclear Envelope Breakdown, and Ran binding domain network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251KHE6	Uncharacterized protein. (498 aa)
	A0A251L461	Nuclear pore complex protein NUP35. (332 aa)
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (148 aa)
	A0A251LC04	WPP domain-containing protein. (539 aa)
	A0A2C9U272	C2H2-type domain-containing protein. (403 aa)
	A0A2C9U4U6	RanBD1 domain-containing protein. (217 aa)
	A0A2C9U5G9	Uncharacterized protein. (520 aa)
	A0A2C9U619	Nucleoporin_N domain-containing protein. (1493 aa)
	A0A2C9U7U2	Uncharacterized protein. (1932 aa)
	A0A2C9U7Y7	Uncharacterized protein. (407 aa)
	A0A2C9U909	TPR_MLP1_2 domain-containing protein. (2075 aa)
	A0A2C9U9U3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (725 aa)
	A0A2C9UDS9	C2H2-type domain-containing protein. (437 aa)
	A0A2C9UEP0	DUF5311 domain-containing protein. (1541 aa)
	A0A2C9UN28	Nup54 domain-containing protein. (401 aa)
	A0A2C9UN92	Uncharacterized protein. (631 aa)
	A0A2C9UXS2	Nuclear pore complex protein NUP35. (329 aa)
	A0A2C9UYN6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1089 aa)
	A0A2C9UYZ6	Nuclear pore protein. (806 aa)
	A0A2C9V3P5	Uncharacterized protein. (1208 aa)
	A0A2C9V3X8	Uncharacterized protein. (800 aa)
	A0A2C9V4A1	Uncharacterized protein. (449 aa)
	A0A2C9V9M1	RanBD1 domain-containing protein. (230 aa)
	A0A2C9VJP7	Uncharacterized protein. (875 aa)
	A0A2C9VP28	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (298 aa)
	A0A2C9VVI7	Uncharacterized protein. (1883 aa)
	A0A2C9W1B9	Peptidase S59 domain-containing protein. (1068 aa)
	A0A2C9W1D2	WD_REPEATS_REGION domain-containing protein. (349 aa)
	A0A2C9W1W1	RanBD1 domain-containing protein. (440 aa)
	A0A2C9W1Y5	Uncharacterized protein. (1974 aa)
	A0A2C9W6P3	C2H2-type domain-containing protein. (425 aa)
	A0A2C9W9U1	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (325 aa)
	A0A2C9WBH0	Uncharacterized protein. (192 aa)
	A0A2C9WBX0	RanBD1 domain-containing protein. (454 aa)
	A0A2C9WCV8	GRIP domain-containing protein. (795 aa)
	A0A2C9WH07	C2H2-type domain-containing protein. (427 aa)
	A0A2C9WIJ7	Uncharacterized protein. (339 aa)
	A0A2C9WJ03	Peptidase S59 domain-containing protein. (1040 aa)
	A0A2C9WMP8	WPP domain-containing protein. (540 aa)
	A0A2C9WNC6	GRIP domain-containing protein. (799 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251KHE6	A0A251L461	A0A251KHE6	A0A251L461	Uncharacterized protein.	Nuclear pore complex protein NUP35.	0.800
A0A251KHE6	A0A251LC04	A0A251KHE6	A0A251LC04	Uncharacterized protein.	WPP domain-containing protein.	0.508
A0A251KHE6	A0A2C9U272	A0A251KHE6	A0A2C9U272	Uncharacterized protein.	C2H2-type domain-containing protein.	0.814
A0A251KHE6	A0A2C9U4U6	A0A251KHE6	A0A2C9U4U6	Uncharacterized protein.	RanBD1 domain-containing protein.	0.750
A0A251KHE6	A0A2C9U619	A0A251KHE6	A0A2C9U619	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.964
A0A251KHE6	A0A2C9U7U2	A0A251KHE6	A0A2C9U7U2	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A251KHE6	A0A2C9U7Y7	A0A251KHE6	A0A2C9U7Y7	Uncharacterized protein.	Uncharacterized protein.	0.814
A0A251KHE6	A0A2C9U909	A0A251KHE6	A0A2C9U909	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.866
A0A251KHE6	A0A2C9U9U3	A0A251KHE6	A0A2C9U9U3	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.912
A0A251KHE6	A0A2C9UDS9	A0A251KHE6	A0A2C9UDS9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.814
A0A251KHE6	A0A2C9UEP0	A0A251KHE6	A0A2C9UEP0	Uncharacterized protein.	DUF5311 domain-containing protein.	0.953
A0A251KHE6	A0A2C9UN28	A0A251KHE6	A0A2C9UN28	Uncharacterized protein.	Nup54 domain-containing protein.	0.962
A0A251KHE6	A0A2C9UN92	A0A251KHE6	A0A2C9UN92	Uncharacterized protein.	Uncharacterized protein.	0.897
A0A251KHE6	A0A2C9UXS2	A0A251KHE6	A0A2C9UXS2	Uncharacterized protein.	Nuclear pore complex protein NUP35.	0.800
A0A251KHE6	A0A2C9UYN6	A0A251KHE6	A0A2C9UYN6	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.962
A0A251KHE6	A0A2C9UYZ6	A0A251KHE6	A0A2C9UYZ6	Uncharacterized protein.	Nuclear pore protein.	0.966
A0A251KHE6	A0A2C9V3X8	A0A251KHE6	A0A2C9V3X8	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A251KHE6	A0A2C9V4A1	A0A251KHE6	A0A2C9V4A1	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A251KHE6	A0A2C9V9M1	A0A251KHE6	A0A2C9V9M1	Uncharacterized protein.	RanBD1 domain-containing protein.	0.750
A0A251KHE6	A0A2C9VP28	A0A251KHE6	A0A2C9VP28	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.860