(10 nodes) Structural constituent of nuclear pore network (Manihot esculenta)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9U619	Nucleoporin_N domain-containing protein. (1493 aa)
	A0A2C9U9U3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (725 aa)
	A0A2C9UEP0	DUF5311 domain-containing protein. (1541 aa)
	A0A2C9UN28	Nup54 domain-containing protein. (401 aa)
	A0A2C9UYN6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1089 aa)
	A0A2C9UYZ6	Nuclear pore protein. (806 aa)
	A0A2C9V3X8	Uncharacterized protein. (800 aa)
	A0A2C9VVI7	Uncharacterized protein. (1883 aa)
	A0A2C9W1Y5	Uncharacterized protein. (1974 aa)
	A0A2C9W9U1	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (325 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9U619	A0A2C9U9U3	Nucleoporin_N domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.992
A0A2C9U619	A0A2C9UEP0	Nucleoporin_N domain-containing protein.	DUF5311 domain-containing protein.	0.996
A0A2C9U619	A0A2C9UN28	Nucleoporin_N domain-containing protein.	Nup54 domain-containing protein.	0.996
A0A2C9U619	A0A2C9UYN6	Nucleoporin_N domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.996
A0A2C9U619	A0A2C9UYZ6	Nucleoporin_N domain-containing protein.	Nuclear pore protein.	0.997
A0A2C9U619	A0A2C9V3X8	Nucleoporin_N domain-containing protein.	Uncharacterized protein.	0.992
A0A2C9U619	A0A2C9VVI7	Nucleoporin_N domain-containing protein.	Uncharacterized protein.	0.999
A0A2C9U619	A0A2C9W1Y5	Nucleoporin_N domain-containing protein.	Uncharacterized protein.	0.998
A0A2C9U619	A0A2C9W9U1	Nucleoporin_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.996
A0A2C9U9U3	A0A2C9U619	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin_N domain-containing protein.	0.992
A0A2C9U9U3	A0A2C9UEP0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	DUF5311 domain-containing protein.	0.993
A0A2C9U9U3	A0A2C9UN28	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nup54 domain-containing protein.	0.991
A0A2C9U9U3	A0A2C9UYN6	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.997
A0A2C9U9U3	A0A2C9UYZ6	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore protein.	0.990
A0A2C9U9U3	A0A2C9V3X8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.990
A0A2C9U9U3	A0A2C9VVI7	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.991
A0A2C9U9U3	A0A2C9W1Y5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.956
A0A2C9U9U3	A0A2C9W9U1	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.996
A0A2C9UEP0	A0A2C9U619	DUF5311 domain-containing protein.	Nucleoporin_N domain-containing protein.	0.996
A0A2C9UEP0	A0A2C9U9U3	DUF5311 domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.993