(5 nodes) HEAT-like repeat, and Chromatin silencing complex network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9UFX8	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (277 aa)
	A0A2C9VC50	Importin subunit alpha; Belongs to the importin alpha family. (518 aa)
	A0A2C9VGT3	Importin N-terminal domain-containing protein. (923 aa)
	A0A2C9WJ42	Importin N-terminal domain-containing protein. (871 aa)
	A0A2C9WN94	Importin subunit alpha; Belongs to the importin alpha family. (515 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9UFX8	A0A2C9VC50	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Importin subunit alpha; Belongs to the importin alpha family.	0.709
A0A2C9UFX8	A0A2C9VGT3	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Importin N-terminal domain-containing protein.	0.843
A0A2C9UFX8	A0A2C9WJ42	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Importin N-terminal domain-containing protein.	0.843
A0A2C9UFX8	A0A2C9WN94	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Importin subunit alpha; Belongs to the importin alpha family.	0.709
A0A2C9VC50	A0A2C9UFX8	Importin subunit alpha; Belongs to the importin alpha family.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.709
A0A2C9VC50	A0A2C9VGT3	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.725
A0A2C9VC50	A0A2C9WJ42	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.783
A0A2C9VGT3	A0A2C9UFX8	Importin N-terminal domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.843
A0A2C9VGT3	A0A2C9VC50	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.725
A0A2C9VGT3	A0A2C9WN94	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.725
A0A2C9WJ42	A0A2C9UFX8	Importin N-terminal domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.843
A0A2C9WJ42	A0A2C9VC50	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.783
A0A2C9WJ42	A0A2C9WN94	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.730
A0A2C9WN94	A0A2C9UFX8	Importin subunit alpha; Belongs to the importin alpha family.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.709
A0A2C9WN94	A0A2C9VGT3	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.725
A0A2C9WN94	A0A2C9WJ42	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.730