(43 nodes) Regulation of chromosome organization network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9V557	Uncharacterized protein. (443 aa)
	A0A2C9V598	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
	A0A2C9V6D3	WD_REPEATS_REGION domain-containing protein. (342 aa)
	A0A2C9VD20	Uncharacterized protein. (367 aa)
	A0A2C9VEZ5	DNA helicase; Belongs to the MCM family. (942 aa)
	A0A2C9VF79	RING-type domain-containing protein. (57 aa)
	A0A2C9VMM7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (189 aa)
	A0A2C9VN78	Telo_bind domain-containing protein. (463 aa)
	A0A2C9VQU3	Uncharacterized protein. (774 aa)
	A0A2C9VTS6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
	A0A2C9VYI8	Uncharacterized protein. (134 aa)
	A0A2C9W5C9	Uncharacterized protein. (760 aa)
	A0A2C9WGR2	Protein kinase domain-containing protein. (846 aa)
	A0A2C9UEH2	WD_REPEATS_REGION domain-containing protein. (772 aa)
	A0A2C9WHG2	CULLIN_2 domain-containing protein; Belongs to the cullin family. (880 aa)
	A0A2C9UAW3	Uncharacterized protein. (756 aa)
	A0A2C9U932	WAPL domain-containing protein. (905 aa)
	A0A2C9U5P5	WAPL domain-containing protein. (900 aa)
	A0A2C9U294	Protein kinase domain-containing protein. (750 aa)
	A0A251LFU1	Uncharacterized protein. (1396 aa)
	A0A2C9UYK0	Helicase ATP-binding domain-containing protein. (1044 aa)
	A0A251KX92	BUB1 N-terminal domain-containing protein. (385 aa)
	A0A251KJL1	APC1_C domain-containing protein. (1825 aa)
	A0A251K9C5	RING-type domain-containing protein. (72 aa)
	A0A251JJM4	Uncharacterized protein. (524 aa)
	A0A2C9WJN7	WD_REPEATS_REGION domain-containing protein. (314 aa)
	A0A2C9WJY6	PHD domain-containing protein. (690 aa)
	A0A2C9UIL0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
	A0A2C9WK60	ANAPC5 domain-containing protein. (914 aa)
	A0A2C9WKC8	Uncharacterized protein. (125 aa)
	A0A2C9UEC7	TPR_REGION domain-containing protein. (544 aa)
	A0A2C9UYC3	TPR_REGION domain-containing protein. (371 aa)
	A0A2C9UTY2	Uncharacterized protein. (759 aa)
	A0A2C9USP7	HORMA domain-containing protein. (207 aa)
	A0A2C9US12	Uncharacterized protein. (89 aa)
	A0A2C9UMY8	HORMA domain-containing protein. (211 aa)
	A0A2C9UKK5	TPR_REGION domain-containing protein. (577 aa)
	A0A2C9UJA1	Uncharacterized protein. (99 aa)
	A0A2C9UC83	Uncharacterized protein. (596 aa)
	A0A2C9UYR8	Uncharacterized protein. (95 aa)
	A0A2C9V151	Uncharacterized protein. (1399 aa)
	A0A2C9V224	BUB1 N-terminal domain-containing protein. (566 aa)
	A0A2C9V543	Uncharacterized protein. (722 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251JJM4	A0A251K9C5	Uncharacterized protein.	RING-type domain-containing protein.	0.888
A0A251JJM4	A0A251KJL1	Uncharacterized protein.	APC1_C domain-containing protein.	0.961
A0A251JJM4	A0A2C9U294	Uncharacterized protein.	Protein kinase domain-containing protein.	0.836
A0A251JJM4	A0A2C9UAW3	Uncharacterized protein.	Uncharacterized protein.	0.863
A0A251JJM4	A0A2C9UC83	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A251JJM4	A0A2C9UEC7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.970
A0A251JJM4	A0A2C9UEH2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.958
A0A251JJM4	A0A2C9UIL0	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.748
A0A251JJM4	A0A2C9UKK5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.894
A0A251JJM4	A0A2C9UMY8	Uncharacterized protein.	HORMA domain-containing protein.	0.972
A0A251JJM4	A0A2C9USP7	Uncharacterized protein.	HORMA domain-containing protein.	0.972
A0A251JJM4	A0A2C9UTY2	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A251JJM4	A0A2C9V543	Uncharacterized protein.	Uncharacterized protein.	0.914
A0A251JJM4	A0A2C9V557	Uncharacterized protein.	Uncharacterized protein.	0.914
A0A251JJM4	A0A2C9V598	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.748
A0A251JJM4	A0A2C9V6D3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.945
A0A251JJM4	A0A2C9VD20	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A251JJM4	A0A2C9VF79	Uncharacterized protein.	RING-type domain-containing protein.	0.888
A0A251JJM4	A0A2C9VMM7	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.748
A0A251JJM4	A0A2C9VTS6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.748