(45 nodes) Meiotic chromosome segregation network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9VPV6	Uncharacterized protein. (103 aa)
	A0A2C9V276	Uncharacterized protein. (634 aa)
	A0A2C9V224	BUB1 N-terminal domain-containing protein. (566 aa)
	A0A2C9V1C9	Shugoshin_C domain-containing protein. (298 aa)
	A0A2C9UTM9	HORMA domain-containing protein. (625 aa)
	A0A2C9US58	Uncharacterized protein. (509 aa)
	A0A251IRD8	Uncharacterized protein. (868 aa)
	A0A2C9US12	Uncharacterized protein. (89 aa)
	A0A251J343	Uncharacterized protein. (289 aa)
	A0A251JJM4	Uncharacterized protein. (524 aa)
	A0A251K4D1	Uncharacterized protein. (497 aa)
	A0A251KX92	BUB1 N-terminal domain-containing protein. (385 aa)
	A0A2C9U5P5	WAPL domain-containing protein. (900 aa)
	A0A2C9UPE0	Uncharacterized protein. (932 aa)
	A0A2C9UPB9	Uncharacterized protein. (342 aa)
	A0A2C9UKF1	Uncharacterized protein. (226 aa)
	A0A2C9UIT0	Uncharacterized protein. (136 aa)
	A0A2C9UII8	Uncharacterized protein. (813 aa)
	A0A2C9UED6	RING-type domain-containing protein. (305 aa)
	A0A2C9UDM2	TP6A_N domain-containing protein. (362 aa)
	A0A2C9U932	WAPL domain-containing protein. (905 aa)
	A0A2C9U7Z9	Uncharacterized protein. (1273 aa)
	A0A2C9U720	Uncharacterized protein; Belongs to the cyclin family. (598 aa)
	A0A2C9VMJ2	Uncharacterized protein. (204 aa)
	A0A2C9VJV7	Shugoshin_C domain-containing protein. (375 aa)
	A0A2C9VD20	Uncharacterized protein. (367 aa)
	A0A2C9VA56	Uncharacterized protein. (596 aa)
	A0A2C9V3W1	Uncharacterized protein. (438 aa)
	A0A2C9V2Z0	TP6A_N domain-containing protein. (382 aa)
	A0A2C9WMU7	SCD domain-containing protein. (1116 aa)
	A0A2C9WLG3	Uncharacterized protein. (792 aa)
	A0A2C9WLF6	ERCC4 domain-containing protein. (975 aa)
	A0A2C9WJY6	PHD domain-containing protein. (690 aa)
	A0A2C9WJE6	Sister chromatid cohesion protein. (1806 aa)
	A0A2C9WJ14	PPIase cyclophilin-type domain-containing protein. (342 aa)
	A0A2C9WI83	Uncharacterized protein. (247 aa)
	A0A2C9W972	DNA_MISMATCH_REPAIR_2 domain-containing protein. (797 aa)
	A0A2C9W6U2	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (668 aa)
	A0A2C9W5L8	RING-type domain-containing protein. (305 aa)
	A0A2C9W354	ERCC4 domain-containing protein. (657 aa)
	A0A2C9W004	Shugoshin_C domain-containing protein. (282 aa)
	A0A2C9VZY1	Replication factor C subunit 1. (984 aa)
	A0A2C9VZ74	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (949 aa)
	A0A2C9VQD3	DUF1767 domain-containing protein. (618 aa)
	A0A2C9VPW9	Uncharacterized protein. (373 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251IRD8	A0A2C9U720	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.534
A0A251IRD8	A0A2C9U7Z9	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A251IRD8	A0A2C9UDM2	Uncharacterized protein.	TP6A_N domain-containing protein.	0.508
A0A251IRD8	A0A2C9UED6	Uncharacterized protein.	RING-type domain-containing protein.	0.405
A0A251IRD8	A0A2C9UII8	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A251IRD8	A0A2C9UIT0	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A251IRD8	A0A2C9UPB9	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A251IRD8	A0A2C9UTM9	Uncharacterized protein.	HORMA domain-containing protein.	0.508
A0A251IRD8	A0A2C9V276	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A251IRD8	A0A2C9V2Z0	Uncharacterized protein.	TP6A_N domain-containing protein.	0.445
A0A251IRD8	A0A2C9VMJ2	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A251IRD8	A0A2C9W5L8	Uncharacterized protein.	RING-type domain-containing protein.	0.405
A0A251IRD8	A0A2C9W972	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.469
A0A251IRD8	A0A2C9WLG3	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A251IRD8	A0A2C9WMU7	Uncharacterized protein.	SCD domain-containing protein.	0.431
A0A251JJM4	A0A2C9U720	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.547
A0A251JJM4	A0A2C9V3W1	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A251JJM4	A0A2C9VD20	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A251KX92	A0A2C9U720	BUB1 N-terminal domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.547
A0A251KX92	A0A2C9V3W1	BUB1 N-terminal domain-containing protein.	Uncharacterized protein.	0.952