(77 nodes) SWI/SNF superfamily-type complex network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9WA11	Uncharacterized protein. (439 aa)
	MANES_S101600	Uncharacterized protein. (155 aa)
	A0A251IVR3	Uncharacterized protein. (100 aa)
	A0A251IW22	SWIB domain-containing protein. (563 aa)
	A0A251JAR1	Uncharacterized protein. (730 aa)
	A0A251JLG3	Uncharacterized protein. (2085 aa)
	A0A251JNV0	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	A0A251K7J1	GLTSCR1 domain-containing protein. (365 aa)
	A0A251KMA2	Uncharacterized protein; Belongs to the actin family. (455 aa)
	A0A251LFU1	Uncharacterized protein. (1396 aa)
	A0A251LL70	HIT-type domain-containing protein. (172 aa)
	A0A251LM03	J domain-containing protein. (670 aa)
	A0A251LSE0	PAPA-1 domain-containing protein. (408 aa)
	A0A2C9TZ75	Uncharacterized protein. (494 aa)
	A0A2C9U647	Uncharacterized protein. (63 aa)
	A0A2C9U9B6	BTP domain-containing protein. (244 aa)
	A0A2C9UBB1	WHIM1 domain-containing protein. (532 aa)
	A0A2C9UD04	Uncharacterized protein. (3567 aa)
	A0A2C9UDF0	Uncharacterized protein. (419 aa)
	A0A2C9UDM9	BAF250_C domain-containing protein. (458 aa)
	A0A2C9UDR6	Uncharacterized protein; Belongs to the actin family. (555 aa)
	A0A2C9UFY8	Uncharacterized protein. (1980 aa)
	A0A2C9UG01	SWIB domain-containing protein. (567 aa)
	A0A2C9UH15	Hydrolase_4 domain-containing protein. (376 aa)
	A0A2C9UHD5	Uncharacterized protein. (2266 aa)
	A0A2C9UHN0	Uncharacterized protein. (1943 aa)
	A0A2C9UIC4	Ubiquitin carboxyl-terminal hydrolase. (330 aa)
	A0A2C9UJG1	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1083 aa)
	A0A2C9UJQ4	J domain-containing protein. (457 aa)
	A0A2C9UJZ3	SANT domain-containing protein. (401 aa)
	A0A2C9UPT1	Uncharacterized protein. (723 aa)
	A0A2C9UQK4	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	A0A2C9URI8	Uncharacterized protein. (1776 aa)
	A0A2C9UW10	BTP domain-containing protein. (579 aa)
	A0A2C9UYR8	Uncharacterized protein. (95 aa)
	A0A2C9V0F4	Bromo domain-containing protein. (769 aa)
	A0A2C9V151	Uncharacterized protein. (1399 aa)
	A0A2C9V1W9	CBFD_NFYB_HMF domain-containing protein. (161 aa)
	A0A2C9V2U3	Uncharacterized protein. (1696 aa)
	A0A2C9V4C1	Uncharacterized protein; Belongs to the actin family. (725 aa)
	A0A2C9V8I8	Uncharacterized protein. (1524 aa)
	A0A2C9VA18	YL1_C domain-containing protein. (358 aa)
	A0A2C9VA57	BTP domain-containing protein. (351 aa)
	A0A2C9VCD4	BTP domain-containing protein. (356 aa)
	A0A2C9VFA8	HIT-type domain-containing protein. (100 aa)
	A0A2C9VFL8	Uncharacterized protein. (944 aa)
	A0A2C9VGX9	PAPA-1 domain-containing protein. (466 aa)
	A0A2C9VIS4	GLTSCR1 domain-containing protein. (350 aa)
	A0A2C9VLK4	DHO_dh domain-containing protein. (427 aa)
	A0A2C9VPY1	Uncharacterized protein. (263 aa)
	A0A2C9VRF0	Uncharacterized protein. (1957 aa)
	A0A2C9VRU3	Uncharacterized protein. (726 aa)
	A0A2C9VS63	PAPA-1 domain-containing protein. (581 aa)
	A0A2C9VU10	Uncharacterized protein. (1014 aa)
	A0A2C9VU32	Post-SET domain-containing protein. (62 aa)
	A0A2C9VUQ5	SANT domain-containing protein. (449 aa)
	A0A2C9VV57	Uncharacterized protein. (561 aa)
	A0A2C9VVP2	Uncharacterized protein. (240 aa)
	A0A2C9VVQ2	Bromo domain-containing protein. (705 aa)
	A0A2C9VVU5	Uncharacterized protein. (567 aa)
	A0A2C9VZN6	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	A0A2C9WNX3	Uncharacterized protein. (566 aa)
	A0A2C9WMZ0	Uncharacterized protein. (1044 aa)
	A0A2C9WMN0	Uncharacterized protein. (141 aa)
	A0A2C9WKY2	DDT domain-containing protein. (715 aa)
	A0A2C9WKJ6	BTP domain-containing protein. (380 aa)
	A0A2C9WJ32	Uncharacterized protein; Belongs to the actin family. (441 aa)
	A0A2C9WHB0	Uncharacterized protein. (561 aa)
	A0A2C9WDU3	DDT domain-containing protein. (714 aa)
	A0A2C9WD17	Uncharacterized protein. (149 aa)
	A0A2C9WB61	BTP domain-containing protein. (348 aa)
	A0A2C9W0B0	Bromo domain-containing protein. (701 aa)
	A0A2C9W0R4	Uncharacterized protein. (1693 aa)
	A0A2C9W719	Bromo domain-containing protein. (868 aa)
	A0A2C9W727	Bromo domain-containing protein. (880 aa)
	A0A2C9W834	Uncharacterized protein; Belongs to the actin family. (592 aa)
	A0A2C9W8E7	BAF250_C domain-containing protein. (458 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251IW22	A0A251K7J1	SWIB domain-containing protein.	GLTSCR1 domain-containing protein.	0.560
A0A251IW22	A0A251KMA2	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.575
A0A251IW22	A0A251LM03	SWIB domain-containing protein.	J domain-containing protein.	0.970
A0A251IW22	A0A2C9TZ75	SWIB domain-containing protein.	Uncharacterized protein.	0.875
A0A251IW22	A0A2C9UD04	SWIB domain-containing protein.	Uncharacterized protein.	0.919
A0A251IW22	A0A2C9UDM9	SWIB domain-containing protein.	BAF250_C domain-containing protein.	0.944
A0A251IW22	A0A2C9UDR6	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.429
A0A251IW22	A0A2C9UG01	SWIB domain-containing protein.	SWIB domain-containing protein.	0.543
A0A251IW22	A0A2C9UJQ4	SWIB domain-containing protein.	J domain-containing protein.	0.970
A0A251IW22	A0A2C9UJZ3	SWIB domain-containing protein.	SANT domain-containing protein.	0.875
A0A251IW22	A0A2C9V4C1	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.405
A0A251IW22	A0A2C9VIS4	SWIB domain-containing protein.	GLTSCR1 domain-containing protein.	0.560
A0A251IW22	A0A2C9VVP2	SWIB domain-containing protein.	Uncharacterized protein.	0.970
A0A251IW22	A0A2C9W834	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.429
A0A251IW22	A0A2C9W8E7	SWIB domain-containing protein.	BAF250_C domain-containing protein.	0.944
A0A251IW22	A0A2C9WJ32	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.984
A0A251JAR1	A0A2C9UBB1	Uncharacterized protein.	WHIM1 domain-containing protein.	0.420
A0A251JAR1	A0A2C9UPT1	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A251JLG3	A0A251KMA2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.467
A0A251JLG3	A0A2C9UFY8	Uncharacterized protein.	Uncharacterized protein.	0.496