(8 nodes) TCR signaling network (Manihot esculenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9UT49	Ubiquitin-like domain-containing protein. (156 aa)
	A0A2C9WNI8	Ubiquitin-like domain-containing protein. (156 aa)
	A0A2C9VSB5	Ubiquitin-like domain-containing protein. (156 aa)
	A0A2C9VJV6	Protein kinase domain-containing protein. (509 aa)
	A0A2C9VF52	Ubiquitin-like domain-containing protein. (33 aa)
	A0A2C9UEX1	TMEM189_B_dmain domain-containing protein. (306 aa)
	A0A2C9UND2	Ubiquitin-like domain-containing protein. (156 aa)
	A0A2C9V3M1	Protein kinase domain-containing protein. (504 aa)

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9UEX1	A0A2C9UND2	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.864
A0A2C9UEX1	A0A2C9UT49	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.864
A0A2C9UEX1	A0A2C9VF52	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.864
A0A2C9UEX1	A0A2C9VSB5	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.864
A0A2C9UEX1	A0A2C9WNI8	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.864
A0A2C9UND2	A0A2C9UEX1	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.864
A0A2C9UT49	A0A2C9UEX1	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.864
A0A2C9VF52	A0A2C9UEX1	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.864
A0A2C9VSB5	A0A2C9UEX1	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.864
A0A2C9WNI8	A0A2C9UEX1	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.864