STRINGSTRING
opuD1 opuD1 ktrC ktrC mscS mscS akc1 akc1 mscL mscL ktrD ktrD ADC48978.1 ADC48978.1 akc2 akc2 ADC49100.1 ADC49100.1 ktrB ktrB ktrA ktrA ectC ectC ectB ectB ectA ectA ectD ectD ADC51272.1 ADC51272.1 ADC51273.1 ADC51273.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
opuD1Glycine betaine transporter, BCCT family; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (538 aa)
ktrCPotassium uptake protein KtrC; COG0569 K+ transport systems, NAD-binding component. (221 aa)
mscSCOG0668 Small-conductance mechanosensitive channel. (277 aa)
akc1Potassium channel 1; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (250 aa)
mscLLarge-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (178 aa)
ktrDK+-transporter KtrD; COG0168 Trk-type K+ transport systems, membrane components. (449 aa)
ADC48978.1Hypothetical protein. (52 aa)
akc2Potassium channel 2; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (339 aa)
ADC49100.1COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (408 aa)
ktrBPotassium transport system subunit KtrB. (76 aa)
ktrAPotassium transport system subunit KtrA; COG0569 K+ transport systems, NAD-binding component. (221 aa)
ectCL-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. (129 aa)
ectBDiaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa)
ectADiaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. (144 aa)
ectDEctoine hydroxylase. (303 aa)
ADC51272.1Glycine betaine/L-proline ABC transporter, ATP-binding protein; COG1125 ABC-type proline/glycine betaine transport systems, ATPase components. (325 aa)
ADC51273.1COG1174 ABC-type proline/glycine betaine transport systems, permease component. (513 aa)
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
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