STRINGSTRING
cpoB cpoB pal pal tolB tolB ACD15183.1 ACD15183.1 ACD15184.1 ACD15184.1 tolQ tolQ ACD15186.1 ACD15186.1 ACD15822.1 ACD15822.1 ACD15823.1 ACD15823.1 ACD15824.1 ACD15824.1 ACD15825.1 ACD15825.1 ACD15855.1 ACD15855.1 ACD15856.1 ACD15856.1 ACD15857.1 ACD15857.1 ACD15858.1 ACD15858.1 ACD15859.1 ACD15859.1 ACD15860.1 ACD15860.1 ACD17772.1 ACD17772.1 ACD17773.1 ACD17773.1 ACD18964.1 ACD18964.1 ACD18965.1 ACD18965.1 ACD18966.1 ACD18966.1 ACD18967.1 ACD18967.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpoBTol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (252 aa)
palPeptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (169 aa)
tolBTol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (430 aa)
ACD15183.1Protein TolA; TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: bxe:Bxe_A3919 TonB protein. (344 aa)
ACD15184.1TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A3918 biopolymer transport protein ExbD/TolR. (148 aa)
tolQProtein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (225 aa)
ACD15186.1TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A3916 4-hydroxybenzoyl-CoA thioesterase. (159 aa)
ACD15822.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A3142 biopolymer transport transmembrane protein, ExbD/TolR like. (139 aa)
ACD15823.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A3141 biopolymer transport transmembrane protein, MotA/TolQ/ExbB like. (243 aa)
ACD15824.1TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (244 aa)
ACD15825.1PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A3139 putative bacterioferritin-associated ferredoxin. (78 aa)
ACD15855.1TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (235 aa)
ACD15856.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A2999 biopolymer transport transmembrane protein, ExbB/TolQ. (301 aa)
ACD15857.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A2998 biopolymer transport protein ExbD/TolR. (140 aa)
ACD15858.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A2997 biopolymer transport protein ExbD/TolR. (142 aa)
ACD15859.1KEGG: bxe:Bxe_A2996 hypothetical protein. (394 aa)
ACD15860.1Hypothetical protein. (50 aa)
ACD17772.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A0575 biopolymer transport protein ExbD/TolR. (143 aa)
ACD17773.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A0574 MotA/TolQ/ExbB proton channel family protein. (238 aa)
ACD18964.1TIGRFAM: TonB family protein; KEGG: bxe:Bxe_B0897 TonB protein. (227 aa)
ACD18965.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_B0898 biopolymer transport protein ExbD/TolR. (132 aa)
ACD18966.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_B0899 biopolymer transport protein, MotA/TolQ/ExbB proton channel family. (215 aa)
ACD18967.1PFAM: TonB-dependent receptor; Cna B domain protein; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0900 TonB-dependent siderophore receptor. (781 aa)
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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