STRINGSTRING
ACD14517.1 ACD14517.1 ACD14518.1 ACD14518.1 ACD14709.1 ACD14709.1 ACD14711.1 ACD14711.1 proC proC ACD15213.1 ACD15213.1 ACD15214.1 ACD15214.1 ACD16213.1 ACD16213.1 ACD16298.1 ACD16298.1 ACD16472.1 ACD16472.1 ACD16473.1 ACD16473.1 ACD16475.1 ACD16475.1 ACD16476.1 ACD16476.1 alr alr ACD17024.1 ACD17024.1 ACD17215.1 ACD17215.1 ACD18274.1 ACD18274.1 ACD18608.1 ACD18608.1 ACD18610.1 ACD18610.1 ACD18804.1 ACD18804.1 ACD18855.1 ACD18855.1 ACD18880.1 ACD18880.1 lcdH lcdH ACD18882.1 ACD18882.1 ACD18883.1 ACD18883.1 ACD18932.1 ACD18932.1 ACD18933.1 ACD18933.1 ACD18934.1 ACD18934.1 ACD18935.1 ACD18935.1 ACD18936.1 ACD18936.1 ACD18937.1 ACD18937.1 ACD19271.1 ACD19271.1 ACD19404.1 ACD19404.1 ACD19405.1 ACD19405.1 ACD19406.1 ACD19406.1 ACD19407.1 ACD19407.1 ACD19412.1 ACD19412.1 ACD19413.1 ACD19413.1 ACD19414.1 ACD19414.1 ACD19415.1 ACD19415.1 betI betI ACD19428.1 ACD19428.1 ACD19429.1 ACD19429.1 ACD19430.1 ACD19430.1 ACD19431.1 ACD19431.1 ACD19432.1 ACD19432.1 ACD19433.1 ACD19433.1 ACD19434.1 ACD19434.1 ACD19435.1 ACD19435.1 ACD19436.1 ACD19436.1 ACD19440.1 ACD19440.1 ACD19479.1 ACD19479.1 ACD19767.1 ACD19767.1 ACD19871.1 ACD19871.1 ACD19872.1 ACD19872.1 ACD20040.1 ACD20040.1 ACD20241.1 ACD20241.1 ACD20242.1 ACD20242.1 ACD20243.1 ACD20243.1 ACD20302.1 ACD20302.1 ACD20416.1 ACD20416.1 ACD20417.1 ACD20417.1 ACD20418.1 ACD20418.1 ACD20419.1 ACD20419.1 ACD20420.1 ACD20420.1 ACD20421.1 ACD20421.1 ACD20422.1 ACD20422.1 ACD20423.1 ACD20423.1 ACD20425.1 ACD20425.1 ACD20427.1 ACD20427.1 ACD20428.1 ACD20428.1 ACD20668.1 ACD20668.1 ACD20676.1 ACD20676.1 ACD20835.1 ACD20835.1 ACD20836.1 ACD20836.1 ACD20837.1 ACD20837.1 ACD21248.1 ACD21248.1 tdh tdh kbl kbl ACD21442.1 ACD21442.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACD14517.1PFAM: 4-vinyl reductase 4VR; KEGG: bxe:Bxe_B1583 hypothetical protein. (182 aa)
ACD14518.1PFAM: peptidase M19 renal dipeptidase; KEGG: cbd:COXBU7E912_0814 renal dipeptidase. (332 aa)
ACD14709.1PFAM: FAD dependent oxidoreductase; KEGG: saq:Sare_1045 FAD dependent oxidoreductase. (353 aa)
ACD14711.1PFAM: FAD dependent oxidoreductase; KEGG: mgi:Mflv_1296 FAD dependent oxidoreductase. (376 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (271 aa)
ACD15213.1PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A3891 aspartate aminotransferase. (554 aa)
ACD15214.1PFAM: aminotransferase class V; KEGG: bch:Bcen2424_0828 aminotransferase, class V. (412 aa)
ACD16213.1PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A2382 aminotransferase AlaT. (416 aa)
ACD16298.1PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2709 hypothetical protein. (390 aa)
ACD16472.1PFAM: aminotransferase class I and II; KEGG: bam:Bamb_5695 transaminase. (374 aa)
ACD16473.1PFAM: FAD dependent oxidoreductase; KEGG: bmu:Bmul_2537 FAD dependent oxidoreductase. (413 aa)
ACD16475.1PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin. (322 aa)
ACD16476.1PFAM: YheO domain protein; KEGG: bvi:Bcep1808_0785 transcriptional regulator, fis family. (231 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (356 aa)
ACD17024.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A1497 hypothetical protein. (116 aa)
ACD17215.1Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (343 aa)
ACD18274.1Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1309 aa)
ACD18608.1PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_A1829 putative ornithine cyclodeaminase. (304 aa)
ACD18610.1D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_A2589 D-amino acid dehydrogenase small subunit. (415 aa)
ACD18804.1KEGG: bam:Bamb_5373 hypothetical protein. (128 aa)
ACD18855.1PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B0791 Na+/monocarboxylate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (493 aa)
ACD18880.1KEGG: bxe:Bxe_B0825 hypothetical protein. (169 aa)
lcdH3-hydroxyacyl-CoA dehydrogenase NAD-binding; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (321 aa)
ACD18882.1PFAM: protein of unknown function DUF849; KEGG: bxe:Bxe_B0827 hypothetical protein. (309 aa)
ACD18883.1TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B0828 ABC glycine betaine transporter, periplasmic ligand binding protein. (321 aa)
ACD18932.1PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 putative dihydrodipicolinate synthase; Belongs to the DapA family. (301 aa)
ACD18933.1PFAM: proline racemase; KEGG: bxe:Bxe_B0874 putative proline racemase; Belongs to the proline racemase family. (341 aa)
ACD18934.1PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0875 putative oxidoreductase. (375 aa)
ACD18935.1PFAM: ferredoxin; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0877 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (591 aa)
ACD18936.1Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bxe:Bxe_B0878 transcriptional regulator, AraC family. (255 aa)
ACD18937.1KEGG: bxe:Bxe_B0879 hypothetical protein. (109 aa)
ACD19271.1PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_B1765 ornithine cyclodeaminase/Mu-crystallin family protein. (311 aa)
ACD19404.1KEGG: bxe:Bxe_B1616 ABC proline/glycine betaine transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (392 aa)
ACD19405.1TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1615 ABC proline/glycine betaine transporter, inner membrane subunit. (300 aa)
ACD19406.1Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1614 transcriptional regulator, AraC family. (332 aa)
ACD19407.1TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1613 ABC proline/glycine betaine transporter, periplasmic ligand binding protein. (311 aa)
ACD19412.1TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1600 sarcosine oxidase, beta subunit, heterotetrameric. (414 aa)
ACD19413.1PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bxe:Bxe_B1599 SoxD. (112 aa)
ACD19414.1TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1598 sarcosine oxidase, alpha subunit, heterotetrameric; Belongs to the GcvT family. (1000 aa)
ACD19415.1PFAM: Sarcosine oxidase gamma subunit; KEGG: bxe:Bxe_B1597 sarcosine oxidase, gamma subunit. (218 aa)
betITranscriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). (195 aa)
ACD19428.1PFAM: peptidase M19 renal dipeptidase; KEGG: bxe:Bxe_B1584 membrane dipeptidase. (323 aa)
ACD19429.1PFAM: 4-vinyl reductase 4VR; KEGG: bxe:Bxe_B1583 hypothetical protein. (178 aa)
ACD19430.1PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1582 NADH-flavin oxidoreductase / NADH oxidase family protein. (687 aa)
ACD19431.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1581 hypothetical protein. (637 aa)
ACD19432.1PFAM: Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_B1580 putative electron transfer flavoprotein alpha-subunit. (393 aa)
ACD19433.1KEGG: bxe:Bxe_B1579 putative electron transfer flavoprotein beta-subunit. (258 aa)
ACD19434.1PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1578 iron-sulphur Rieske protein. (437 aa)
ACD19435.1PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_B1577 putative ferredoxin oxidoreductase protein. (414 aa)
ACD19436.1PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1576 ABC proline/glycine betaine transporter, periplasmic ligand binding protein. (285 aa)
ACD19440.1TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1572 ABC proline/glycine betaine transporter, periplasmic ligand binding protein. (316 aa)
ACD19479.1TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rfr:Rfer_4054 alanine dehydrogenase; Belongs to the AlaDH/PNT family. (374 aa)
ACD19767.1KEGG: bxe:Bxe_B1199 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit. (295 aa)
ACD19871.1PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_6669 GCN5-related N-acetyltransferase. (300 aa)
ACD19872.1PFAM: FAD dependent oxidoreductase; KEGG: rle:pRL120605 putative amino acid deaminase. (441 aa)
ACD20040.1PFAM: proline racemase; KEGG: bxe:Bxe_B1024 putative proline racemase; Belongs to the proline racemase family. (335 aa)
ACD20241.1PFAM: protein of unknown function DUF861 cupin_3; KEGG: bam:Bamb_6360 protein of unknown function DUF861, cupin_3. (244 aa)
ACD20242.1PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6361 FAD dependent oxidoreductase. (441 aa)
ACD20243.1PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6362 FAD dependent oxidoreductase. (425 aa)
ACD20302.1Threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: bxe:Bxe_B2204 threonine aldolase. (335 aa)
ACD20416.1PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1501 FAD dependent oxidoreductase. (389 aa)
ACD20417.1PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1500 pyridine nucleotide-disulphide oxidoreductase. (468 aa)
ACD20418.1KEGG: bxe:Bxe_B1499 putative NAD(FAD)-dependent dehydrogenase. (104 aa)
ACD20419.1KEGG: bxe:Bxe_B1498 ABC peptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (614 aa)
ACD20420.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1497 ABC peptide transporter, inner membrane subunit. (316 aa)
ACD20421.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1496 ABC peptide transporter, inner membrane subunit. (317 aa)
ACD20422.1PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B1495 ABC peptide transporter, periplasmic ligand binding protein. (538 aa)
ACD20423.1PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1494 FAD dependent oxidoreductase. (424 aa)
ACD20425.1PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1491 hypothetical protein. (294 aa)
ACD20427.1PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B1489 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (465 aa)
ACD20428.1PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B1488 transcriptional regulator, AsnC family. (165 aa)
ACD20668.1PFAM: FAD dependent oxidoreductase; KEGG: mes:Meso_0567 FAD dependent oxidoreductase. (441 aa)
ACD20676.1PFAM: protein of unknown function DUF849; KEGG: reu:Reut_A1631 protein of unknown function DUF849, prokaryotic. (274 aa)
ACD20835.1PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4345 FAD dependent oxidoreductase. (374 aa)
ACD20836.1PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_4341 BFD-like (2Fe-2S)-binding region. (471 aa)
ACD20837.1Hypothetical protein; KEGG: pol:Bpro_4342 putative sarcosine oxidase alpha subunit. (130 aa)
ACD21248.1Serine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: bxe:Bxe_B3001 serine--glyoxylate transaminase. (406 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (343 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (399 aa)
ACD21442.1KEGG: rru:Rru_A3686 alanine dehydrogenase and pyridine nucleotide transhydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; Belongs to the AlaDH/PNT family. (372 aa)
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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