STRINGSTRING
ubiX ubiX ACD14535.1 ACD14535.1 metK metK ctaB ctaB ubiA ubiA ACD15146.1 ACD15146.1 ACD15149.1 ACD15149.1 miaA miaA ACD15318.1 ACD15318.1 hemC hemC ACD15638.1 ACD15638.1 ACD15846.1 ACD15846.1 ACD15977.1 ACD15977.1 ACD16291.1 ACD16291.1 ACD16386.1 ACD16386.1 ubiX-2 ubiX-2 ACD16847.1 ACD16847.1 kdsA kdsA ACD17164.1 ACD17164.1 ACD17255.1 ACD17255.1 ACD17387.1 ACD17387.1 aroA aroA ACD17492.1 ACD17492.1 ribH ribH nadA nadA speE speE ubiX-3 ubiX-3 murA murA thiE thiE ACD18412.1 ACD18412.1 ACD18630.1 ACD18630.1 ACD18631.1 ACD18631.1 ACD19051.1 ACD19051.1 ACD19098.1 ACD19098.1 ACD19361.1 ACD19361.1 ACD20535.1 ACD20535.1 kdsA-2 kdsA-2 ACD20711.1 ACD20711.1 ACD20863.1 ACD20863.1 ACD21315.1 ACD21315.1 ACD21325.1 ACD21325.1 ubiX-4 ubiX-4
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (197 aa)
ACD14535.1PFAM: protein of unknown function DUF336; KEGG: gox:GOX0922 hypothetical protein. (125 aa)
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (396 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (301 aa)
ubiA4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (287 aa)
ACD15146.1TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bxe:Bxe_A3976 protein of unknown function DUF80; Belongs to the Cob(I)alamin adenosyltransferase family. (184 aa)
ACD15149.1Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (357 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (319 aa)
ACD15318.1PFAM: UbiA prenyltransferase; KEGG: bxe:Bxe_A3784 hypothetical protein. (474 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (342 aa)
ACD15638.1KEGG: bxe:Bxe_A3323 hypothetical protein. (310 aa)
ACD15846.1PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A3010 putative glutathione S-transferase domain protein. (336 aa)
ACD15977.1PFAM: Glutathione S-transferase domain; KEGG: rso:RSc3309 probable glutathione S-transferase protein. (206 aa)
ACD16291.1PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_A2303 putative phytoene synthase. (292 aa)
ACD16386.1PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate. (134 aa)
ubiX-23-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (208 aa)
ACD16847.1Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (260 aa)
kdsATIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: bxe:Bxe_A1572 2-dehydro-3-deoxyphosphooctonate aldolase. (284 aa)
ACD17164.1O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bxe:Bxe_A1357 O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (456 aa)
ACD17255.1Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (299 aa)
ACD17387.1TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A0990 cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (300 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (434 aa)
ACD17492.1TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: bxe:Bxe_A0894 riboflavin synthase subunit alpha. (204 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (168 aa)
nadAQuinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. (379 aa)
speESpermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (290 aa)
ubiX-33-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (199 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (420 aa)
thiEThiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (367 aa)
ACD18412.1PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0485 squalene/phytoene synthase family protein. (388 aa)
ACD18630.1PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cps:CPS_4049 FO synthase subunit 1. (386 aa)
ACD18631.1PFAM: Radical SAM domain protein; KEGG: pde:Pden_1115 radical SAM domain protein. (435 aa)
ACD19051.1Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (372 aa)
ACD19098.1PFAM: protein of unknown function DUF336; KEGG: xau:Xaut_1201 protein of unknown function DUF336. (181 aa)
ACD19361.1cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (200 aa)
ACD20535.1PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A4093 hypothetical protein. (181 aa)
kdsA-2TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: bpd:BURPS668_3213 3-deoxy-8-phosphooctulonate synthase. (286 aa)
ACD20711.1PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate. (134 aa)
ACD20863.1TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B2556 tRNA 2-selenouridine synthase; Belongs to the SelU family. (355 aa)
ACD21315.1TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0010 putative squalene/phytoene synthase. (282 aa)
ACD21325.1TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0019 putative squalene/phytoene synthase. (288 aa)
ubiX-43-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (196 aa)
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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