STRINGSTRING
Daci_0590 Daci_0590 Daci_0591 Daci_0591 Daci_0592 Daci_0592 Daci_0593 Daci_0593 Daci_0594 Daci_0594 Daci_0595 Daci_0595 Daci_2022 Daci_2022 Daci_2817 Daci_2817 Daci_2829 Daci_2829 Daci_4501 Daci_4501 Daci_4502 Daci_4502 Daci_5367 Daci_5367 Daci_5368 Daci_5368 Daci_5506 Daci_5506 Daci_5507 Daci_5507 Daci_5662 Daci_5662 Daci_5672 Daci_5672
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_0590PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4316 uncharacterized protein UPF0065. (324 aa)
Daci_0591PFAM: Phosphoglycerate mutase; KEGG: aav:Aave_4443 phosphoglycerate mutase. (227 aa)
Daci_0592TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pol:Bpro_4242 phenazine biosynthesis PhzC/PhzF protein. (319 aa)
Daci_0593PFAM: aminotransferase class I and II; KEGG: aav:Aave_4437 putative transcriptional regulator, GntR family. (450 aa)
Daci_0594PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3843 hypothetical protein. (200 aa)
Daci_0595PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_4434 transcriptional regulator, GntR family. (483 aa)
Daci_2022PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1891 transcriptional regulator, MocR family. (509 aa)
Daci_2817PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bbr:BB2428 putative GntR-family transcriptional regulator. (487 aa)
Daci_2829PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3169 putative transcriptional regulator, GntR family. (398 aa)
Daci_4501KEGG: ajs:Ajs_4147 hypothetical protein. (77 aa)
Daci_4502PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rme:Rmet_5794 transcriptional regulator, GntR family. (460 aa)
Daci_5367PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_3430 transcriptional regulator, GntR family. (494 aa)
Daci_5368Hypothetical protein. (181 aa)
Daci_5506PFAM: protein of unknown function DUF34; KEGG: ajs:Ajs_0786 protein of unknown function DUF34. (253 aa)
Daci_5507PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_1058 major facilitator superfamily MFS_1. (441 aa)
Daci_5662Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_B2576 putative aminotransferase. (425 aa)
Daci_5672PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: vei:Veis_4287 putative transcriptional regulator, GntR family. (508 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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