STRINGSTRING
Daci_2388 Daci_2388 Daci_2393 Daci_2393 Daci_3306 Daci_3306 Daci_3315 Daci_3315 Daci_3928 Daci_3928 Daci_4325 Daci_4325 Daci_4545 Daci_4545 Daci_4824 Daci_4824 Daci_4826 Daci_4826 Daci_4827 Daci_4827 Daci_4828 Daci_4828 Daci_4829 Daci_4829 Daci_5039 Daci_5039 Daci_5374 Daci_5374 Daci_5375 Daci_5375
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_2388PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase/isomerase. (269 aa)
Daci_2393PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein. (596 aa)
Daci_3306PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1678 AMP-dependent synthetase and ligase. (545 aa)
Daci_3315PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_1687 acyl-CoA dehydrogenase domain protein. (645 aa)
Daci_3928KEGG: pfl:PFL_3184 acyl-CoA dehydrogenase, putative. (366 aa)
Daci_4325PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1264 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (534 aa)
Daci_4545PFAM: AMP-dependent synthetase and ligase; KEGG: aav:Aave_3157 AMP-dependent synthetase and ligase. (564 aa)
Daci_4824PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_1006 AMP-dependent synthetase and ligase. (551 aa)
Daci_4826PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5438 AMP-dependent synthetase and ligase. (520 aa)
Daci_4827PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rfr:Rfer_0994 acyl-CoA dehydrogenase-like. (382 aa)
Daci_4828PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein. (296 aa)
Daci_4829PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A3284 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
Daci_5039PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase. (548 aa)
Daci_5374PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_3224 acyl-CoA dehydrogenase domain protein. (393 aa)
Daci_5375PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3440 acyl-CoA dehydrogenase domain protein. (371 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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