STRINGSTRING
Daci_0537 Daci_0537 Daci_0696 Daci_0696 Daci_0927 Daci_0927 Daci_0928 Daci_0928 Daci_0929 Daci_0929 Daci_0946 Daci_0946 Daci_1072 Daci_1072 Daci_1265 Daci_1265 Daci_1266 Daci_1266 Daci_1405 Daci_1405 Daci_2133 Daci_2133 Daci_3165 Daci_3165 Daci_3166 Daci_3166 Daci_3167 Daci_3167 Daci_3480 Daci_3480 Daci_3751 Daci_3751 Daci_4745 Daci_4745 Daci_4746 Daci_4746 Daci_4747 Daci_4747 Daci_4748 Daci_4748 Daci_4749 Daci_4749 Daci_4752 Daci_4752 Daci_4753 Daci_4753 Daci_4754 Daci_4754 Daci_4755 Daci_4755 Daci_4756 Daci_4756 Daci_4757 Daci_4757 Daci_4758 Daci_4758 Daci_4759 Daci_4759 Daci_4760 Daci_4760
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_0537PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase. (654 aa)
Daci_0696PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase. (521 aa)
Daci_0927KEGG: rha:RHA1_ro07024 hypothetical protein. (421 aa)
Daci_0928PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_4454 AMP-dependent synthetase and ligase. (553 aa)
Daci_0929KEGG: rme:Rmet_4455 hypothetical protein. (327 aa)
Daci_0946PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase. (559 aa)
Daci_1072PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_1683 AMP-dependent synthetase and ligase. (532 aa)
Daci_1265PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase. (566 aa)
Daci_1266KEGG: ajs:Ajs_0517 PGAP1 family protein. (332 aa)
Daci_1405PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2076 long-chain-fatty-acid--CoA ligase. (514 aa)
Daci_2133KEGG: nca:Noca_4310 hypothetical protein. (763 aa)
Daci_3165PFAM: conserved hypothetical protein; KEGG: reh:H16_A3350 probable extra-cytoplasmic solute receptor. (325 aa)
Daci_3166PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_A3057 AMP-dependent synthetase and ligase. (501 aa)
Daci_3167PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein. (301 aa)
Daci_3480PFAM: peptidase S45 penicillin amidase; KEGG: aav:Aave_1140 peptidase S45, penicillin amidase. (816 aa)
Daci_3751PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2038 AMP-dependent synthetase and ligase. (647 aa)
Daci_4745KEGG: bmn:BMA10247_0877 hypothetical protein. (284 aa)
Daci_4746KEGG: aav:Aave_3724 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (571 aa)
Daci_4747PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nmu:Nmul_A1827 lipolytic enzyme. (321 aa)
Daci_4748KEGG: nmu:Nmul_A1824 hypothetical protein. (400 aa)
Daci_4749KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH). (432 aa)
Daci_4752TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_2028 ferric siderophore receptor. (799 aa)
Daci_4753TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase. (6176 aa)
Daci_4754TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bpl:BURPS1106A_A2212 non-ribosomal peptide synthase. (3331 aa)
Daci_4755Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: aav:Aave_3732 beta-ketoacyl synthase. (1560 aa)
Daci_4756TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: aav:Aave_3733 amino acid adenylation domain. (1789 aa)
Daci_4757PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: aav:Aave_3734 taurine catabolism dioxygenase TauD/TfdA. (329 aa)
Daci_4758PFAM: 4'-phosphopantetheinyl transferase; KEGG: nmu:Nmul_A1833 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (229 aa)
Daci_4759PFAM: Thioesterase; KEGG: nmu:Nmul_A1834 thioesterase. (247 aa)
Daci_4760PFAM: MbtH domain protein; KEGG: aav:Aave_3736 MbtH domain protein. (121 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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