STRINGSTRING
Daci_1126 Daci_1126 Daci_1267 Daci_1267 Daci_2036 Daci_2036 Daci_3596 Daci_3596 Daci_3597 Daci_3597 Daci_5338 Daci_5338
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_1126PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_0742 fumarylacetoacetate (FAA) hydrolase. (340 aa)
Daci_1267KEGG: aav:Aave_4193 phenylalanine-4-hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase. (296 aa)
Daci_2036Fumarylacetoacetase; KEGG: bxe:Bxe_A2724 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969. (438 aa)
Daci_3596PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_2473 fumarylacetoacetate (FAA) hydrolase. (231 aa)
Daci_3597TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase. (221 aa)
Daci_5338PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ajs:Ajs_3348 transcriptional coactivator/pterin dehydratase. (105 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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