STRINGSTRING
Daci_5853 Daci_5853 Daci_5894 Daci_5894 Daci_0635 Daci_0635 Daci_1170 Daci_1170 Daci_2952 Daci_2952 Daci_3269 Daci_3269 Daci_3272 Daci_3272 Daci_3275 Daci_3275 Daci_3326 Daci_3326 Daci_3562 Daci_3562 Daci_3808 Daci_3808 Daci_4408 Daci_4408 Daci_4409 Daci_4409 Daci_4751 Daci_4751 Daci_5266 Daci_5266 Daci_5289 Daci_5289 Daci_5891 Daci_5891
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_5853anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor. (375 aa)
Daci_5894anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE0979 putative transmembrane sensor. (353 aa)
Daci_0635KEGG: aav:Aave_4418 anti-sigma-28 factor, FlgM. (106 aa)
Daci_1170anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor. (356 aa)
Daci_2952anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor. (319 aa)
Daci_3269anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor. (336 aa)
Daci_3272anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component. (327 aa)
Daci_3275anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3492 Fe2+-dicitrate sensor, membrane component. (327 aa)
Daci_3326TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR. (444 aa)
Daci_3562PFAM: FecR protein; KEGG: pfl:PFL_2292 sigma factor regulatory protein FecR. (323 aa)
Daci_3808KEGG: psp:PSPPH_0345 RNA polymerase sigma-70 family protein. (248 aa)
Daci_4408Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_2973 anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase. (347 aa)
Daci_4409PFAM: ATP-binding region ATPase domain protein; KEGG: aav:Aave_2972 putative anti-sigma regulatory factor, serine/threonine protein kinase. (134 aa)
Daci_4751anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor. (344 aa)
Daci_5266PFAM: Anti sigma-E protein RseA family protein; KEGG: ajs:Ajs_3273 anti sigma-E protein, RseA. (238 aa)
Daci_5289KEGG: pna:Pnap_1085 putative transmembrane protein. (275 aa)
Daci_5891anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor. (327 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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