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| | Daci_6028 | KEGG: aav:Aave_4755 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (431 aa) |
| | Daci_0040 | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eli:ELI_06420 glyoxalase family protein. (183 aa) |
| | Daci_0044 | PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0023 glutathione S-transferase, C-terminal domain. (216 aa) |
| | Daci_0076 | TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1918 benzoate-coenzyme A ligase. (518 aa) |
| | Daci_0087 | TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_3179 acetoacetyl-CoA synthase. (704 aa) |
| | hutH | KEGG: aav:Aave_2965 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase. (523 aa) |
| | hutU | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (577 aa) |
| | hutI | KEGG: aav:Aave_2961 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3. (431 aa) |
| | Daci_0184 | PFAM: Amidase; KEGG: rrs:RoseRS_3083 amidase. (480 aa) |
| | Daci_0202 | PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_0114 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (290 aa) |
| | gatB | glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (481 aa) |
| | gatA | glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (498 aa) |
| | gatC | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (99 aa) |
| | rpsL | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (125 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (157 aa) |
| | fusA | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (702 aa) |
| | tuf | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (224 aa) |
| | rplD | Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (206 aa) |
| | rplW | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (104 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplV | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (110 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (290 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa) |
| | rpmC | PFAM: ribosomal protein L29; KEGG: aav:Aave_0346 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (65 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (89 aa) |
| | Daci_0454 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. (195 aa) |
| | tuf-2 | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (175 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (125 aa) |
| | Daci_0523 | PFAM: Glutathione S-transferase domain; KEGG: vei:Veis_4930 glutathione S-transferase, N-terminal domain. (220 aa) |
| | Daci_0536 | KEGG: vei:Veis_1658 hypothetical protein. (274 aa) |
| | argS | KEGG: aav:Aave_0414 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. (565 aa) |
| | Daci_0748 | KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane. (198 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (410 aa) |
| | Daci_0755 | PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 phosphate butyryltransferase. (492 aa) |
| | Daci_0780 | Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: aav:Aave_0589 gamma-glutamyltransferase. (568 aa) |
| | fmt | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (327 aa) |
| | def | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (170 aa) |
| | Daci_0851 | PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_4025 glutathione S-transferase, N-terminal domain. (206 aa) |
| | Daci_0907 | PFAM: Glutathione S-transferase domain; KEGG: cvi:CV_2745 probable glutathione S-transferase family protein. (240 aa) |
| | Daci_0922 | PFAM: beta-lactamase domain protein; KEGG: rpa:RPA0365 beta-lactamase-like. (298 aa) |
| | Daci_0941 | TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mfa:Mfla_1103 secretion chaperone CsaA. (128 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (106 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rplR | Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (121 aa) |
| | rpsE | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (173 aa) |
| | rpmD | PFAM: ribosomal protein L30; KEGG: vei:Veis_2307 ribosomal protein L30. (60 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (143 aa) |
| | rpsM | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (121 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (134 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (207 aa) |
| | rplQ | PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 ribosomal protein L17. (130 aa) |
| | ureE | UreE urease accessory domain protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. (216 aa) |
| | ureC | Urease, alpha subunit; KEGG: reh:H16_A1084 UreA amidohydrolase (urease) alpha subunit; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; Amidohydrolase 3; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (567 aa) |
| | ureB | KEGG: bxe:Bxe_A3693 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; Belongs to the urease beta subunit family. (105 aa) |
| | ureA | Urease, gamma subunit; KEGG: reh:H16_A1081 UreA amidohydrolase (urease) gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; Belongs to the urease gamma subunit family. (100 aa) |
| | Daci_1259 | PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase, N-terminal domain. (229 aa) |
| | glyQ | KEGG: ajs:Ajs_0527 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit. (312 aa) |
| | glyS | glycyl-tRNA synthetase, beta subunit; KEGG: aav:Aave_4177 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit. (704 aa) |
| | Daci_1342 | KEGG: vei:Veis_1900 hypothetical protein. (276 aa) |
| | Daci_1348 | PFAM: thioesterase superfamily protein; KEGG: aav:Aave_4080 thioesterase superfamily protein. (158 aa) |
| | Daci_1435 | KEGG: aav:Aave_3307 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase. (662 aa) |
| | Daci_1444 | PFAM: Amidase; KEGG: bpe:BP1874 putative amidase. (456 aa) |
| | Daci_1495 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (454 aa) |
| | Daci_1546 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (312 aa) |
| | Daci_1603 | PFAM: dihydrodipicolinate synthetase; KEGG: bbr:BB3070 probable dihydrodipicolinate synthase; Belongs to the DapA family. (337 aa) |
| | Daci_1606 | PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like. (229 aa) |
| | Daci_1672 | KEGG: aav:Aave_3908 biotin synthesis protein BioC. (300 aa) |
| | Daci_1761 | TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1385 acetyl-coenzyme A synthetase. (660 aa) |
| | Daci_1766 | TIGRFAM: malonate decarboxylase, beta subunit; KEGG: mpt:Mpe_A2893 beta subunit of malonate decarboxylase. (305 aa) |
| | Daci_1796 | KEGG: pol:Bpro_0197 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. (341 aa) |
| | panC | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (283 aa) |
| | panB | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (293 aa) |
| | bioF | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (405 aa) |
| | bioD | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (233 aa) |
| | Daci_1834 | TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aav:Aave_3841 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa) |
| | panD | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (126 aa) |
| | metG | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (717 aa) |
| | Daci_1877 | PFAM: PepSY-associated TM helix domain protein; KEGG: aav:Aave_3008 PepSY-associated TM helix domain protein. (395 aa) |
| | serS | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (438 aa) |
| | Daci_1927 | PFAM: protein of unknown function DUF1508; KEGG: pfo:Pfl_1378 duplicated hypothetical protein. (65 aa) |
| | Daci_1991 | PFAM: phosphate acetyl/butaryl transferase; KEGG: acr:Acry_3031 phosphate butyryltransferase. (324 aa) |
| | Daci_2093 | PFAM: Amidase; KEGG: pfl:PFL_1361 amidase family protein. (477 aa) |
| | Daci_2109 | KEGG: ajs:Ajs_1115 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; PFAM: peptidase M20; peptidase dimerisation domain protein. (591 aa) |
| | Daci_2120 | KEGG: aav:Aave_1114 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase. (606 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (97 aa) |
| | Daci_2189 | KEGG: aav:Aave_1974 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK. (179 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (970 aa) |
| | Daci_2217 | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aav:Aave_1994 glyoxalase/bleomycin resistance protein/dioxygenase. (209 aa) |
| | Daci_2270 | TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_2133 acetoacetyl-CoA synthase. (654 aa) |
| | fusA-2 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (700 aa) |
| | Daci_2356 | TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ecp:ECP_3590 glutathione reductase. (465 aa) |
| | rpsU | PFAM: ribosomal protein S21; KEGG: ajs:Ajs_2858 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (70 aa) |
| | Daci_2364 | HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2846 HI0933 family protein. (406 aa) |
| | Daci_2365 | PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_2844 thioesterase superfamily protein. (168 aa) |
| | Daci_2402 | PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor. (134 aa) |
| | Daci_2431 | PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_2208 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (339 aa) |
| | Daci_2459 | TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: bur:Bcep18194_A4861 class I peptide chain release factor. (199 aa) |
| | gshA | TIGRFAM: glutamate--cysteine ligase; KEGG: ajs:Ajs_2521 glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (509 aa) |
| | Daci_2474 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (317 aa) |
| | glnS | KEGG: aav:Aave_2300 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic. (628 aa) |
| | Daci_2493 | PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor. (132 aa) |
| | cysS | KEGG: ajs:Ajs_1623 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. (461 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (325 aa) |
| | Daci_2603 | TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein. (217 aa) |
| | Daci_2637 | TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein. (241 aa) |
| | Daci_2717 | KEGG: rme:Rmet_3020 putative conjugal transfer TRAF transmembrane protein. (195 aa) |
| | acsA | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (666 aa) |
| | Daci_2797 | PFAM: aminotransferase class-III; KEGG: vei:Veis_1705 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (447 aa) |
| | Daci_2865 | KEGG: aav:Aave_0970 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein. (421 aa) |
| | efp | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (184 aa) |
| | Daci_2903 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2608 ABC transporter related. (553 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (953 aa) |
| | smpB | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (173 aa) |
| | Daci_3065 | KEGG: ret:RHE_CH02944 hypothetical protein. (241 aa) |
| | Daci_3101 | PFAM: Glutathione S-transferase domain; KEGG: reh:H16_B0451 glutathione S-transferase. (210 aa) |
| | infA | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (87 aa) |
| | prfB | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (386 aa) |
| | Daci_3323 | PFAM: Glutathione S-transferase domain; KEGG: rle:RL1425 putative glutathione S-transferase. (227 aa) |
| | Daci_3342 | PFAM: dihydrodipicolinate synthetase; KEGG: aav:Aave_1393 dihydrodipicolinate synthetase; Belongs to the DapA family. (312 aa) |
| | Daci_3485 | TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bxe:Bxe_B2548 translation elongation factor, selenocysteine-specific. (643 aa) |
| | selA | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (484 aa) |
| | Daci_3494 | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (421 aa) |
| | Daci_3511 | Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: vei:Veis_3048 citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (292 aa) |
| | Daci_3597 | TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase. (221 aa) |
| | rpmJ | PFAM: ribosomal protein L36; KEGG: pfl:PFL_3806 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (49 aa) |
| | Daci_3700 | TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_3147 maleylacetoacetate isomerase. (213 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (353 aa) |
| | Daci_3783 | Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: ret:RHE_CH02146 gamma-glutamyltranspeptidase protein. (533 aa) |
| | Daci_3941 | ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (208 aa) |
| | Daci_3965 | TIGRFAM: propionate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2016 propionate--CoA ligase. (628 aa) |
| | Daci_3971 | PFAM: Glutathione S-transferase domain; KEGG: pfo:Pfl_2223 glutathione S-transferase family protein. (279 aa) |
| | Daci_4029 | KEGG: vco:VC0395_0589 hypothetical protein. (128 aa) |
| | gluQ | Glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. (312 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (874 aa) |
| | Daci_4192 | Chromosome segregation ATPase-like protein; KEGG: hpy:HP0452 hypothetical protein. (880 aa) |
| | Daci_4224 | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rme:Rmet_2509 threonyl/alanyl tRNA synthetase, SAD. (236 aa) |
| | Daci_4319 | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppu:PP_4040 glyoxalase family protein. (118 aa) |
| | Daci_4353 | Amidase, hydantoinase/carbamoylase family; KEGG: bbr:BB2432 N-carbamoyl-L-amino acid amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (430 aa) |
| | Daci_4468 | PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB4413 probable acid-coenzyme A ligase. (546 aa) |
| | Daci_4496 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (298 aa) |
| | Daci_4564 | Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3878 gamma-glutamyltransferase. (543 aa) |
| | Daci_4574 | PFAM: beta-lactamase; KEGG: ajs:Ajs_2328 beta-lactamase. (303 aa) |
| | Daci_4576 | PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: ajs:Ajs_2333 glutaredoxin. (221 aa) |
| | pheT | KEGG: ajs:Ajs_2395 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (815 aa) |
| | pheS | TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: aav:Aave_2855 phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (350 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpmI | PFAM: ribosomal protein L35; KEGG: aav:Aave_2857 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa) |
| | infC | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (205 aa) |
| | thrS | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). (643 aa) |
| | infA-2 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (82 aa) |
| | Daci_4710 | PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_4586 glutathione S-transferase. (207 aa) |
| | Daci_4724 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (561 aa) |
| | Daci_4745 | KEGG: bmn:BMA10247_0877 hypothetical protein. (284 aa) |
| | Daci_4748 | KEGG: nmu:Nmul_A1824 hypothetical protein. (400 aa) |
| | Daci_4760 | PFAM: MbtH domain protein; KEGG: aav:Aave_3736 MbtH domain protein. (121 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (468 aa) |
| | Daci_4772 | TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ajs:Ajs_2739 FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family. (440 aa) |
| | Daci_4790 | TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ajs:Ajs_2754 YbaK/EbsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (164 aa) |
| | Daci_4837 | PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0259 glutathione S-transferase, N-terminal domain; Belongs to the GST superfamily. (206 aa) |
| | Daci_4838 | TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: rfr:Rfer_1750 hypothetical protein. (111 aa) |
| | def-2 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (179 aa) |
| | Daci_4904 | HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_2353 HI0933 family protein. (458 aa) |
| | Daci_4909 | PFAM: ribosomal protein L31; KEGG: ajs:Ajs_2363 ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (81 aa) |
| | Daci_4924 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (278 aa) |
| | frr | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (186 aa) |
| | tsf | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (298 aa) |
| | rpsB | PFAM: ribosomal protein S2; KEGG: aav:Aave_1823 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (250 aa) |
| | hisS | KEGG: ajs:Ajs_1171 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein. (431 aa) |
| | Daci_5051 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (325 aa) |
| | Daci_5077 | PFAM: Ureidoglycolate hydrolase; KEGG: csa:Csal_0080 ureidoglycolate hydrolase. (177 aa) |
| | Daci_5104 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (410 aa) |
| | Daci_5122 | TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMc01967 putative agmatinase protein; Belongs to the arginase family. (356 aa) |
| | rpsO | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (88 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (150 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (93 aa) |
| | rpmH | PFAM: ribosomal protein L34; KEGG: vei:Veis_5015 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (120 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (291 aa) |
| | lysS | TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aav:Aave_1204 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (519 aa) |
| | Daci_5263 | KEGG: aav:Aave_1194 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family. (325 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (602 aa) |
| | rpmF | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: aav:Aave_1181 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (60 aa) |
| | Daci_5303 | KEGG: xcb:XC_0339 hypothetical protein. (129 aa) |
| | Daci_5308 | PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase; Belongs to the amidase family. (466 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (146 aa) |
| | rpsP | PFAM: ribosomal protein S16; KEGG: ajs:Ajs_3355 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (84 aa) |
| | rpmB | PFAM: ribosomal protein L28; KEGG: ajs:Ajs_3384 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (77 aa) |
| | rpmG | PFAM: ribosomal protein L33; KEGG: aav:Aave_3429 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (56 aa) |
| | ileS | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (951 aa) |
| | trpS | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (430 aa) |
| | rplY | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (209 aa) |
| | pth | Aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (207 aa) |
| | Daci_5451 | PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0876 NUDIX hydrolase. (161 aa) |
| | aspS | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (600 aa) |
| | prfA | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (360 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] (581 aa) |
| | rpmA | PFAM: ribosomal protein L27; KEGG: aav:Aave_3674 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | Daci_5500 | PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_3693 glutathione S-transferase, N-terminal domain. (203 aa) |
| | Daci_5640 | PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2594 probable glutathione-S-transferase protein. (225 aa) |
| | Daci_5702 | PFAM: Glutathione S-transferase domain; KEGG: xac:XAC1299 glutathione S-transferase; Belongs to the GST superfamily. (214 aa) |
| | Daci_5811 | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN3005 hypothetical protein. (129 aa) |
| | Daci_5855 | PFAM: Glutathione S-transferase domain; KEGG: ccr:CC_2901 glutathione S-transferase family protein. (213 aa) |
| | Daci_5863 | PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1636 thioesterase superfamily protein. (132 aa) |
| | Daci_5883 | KEGG: pna:Pnap_1452 hypothetical protein. (205 aa) |
| | tyrS | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (410 aa) |
| | rpsI | PFAM: ribosomal protein S9; KEGG: ajs:Ajs_0626 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | prfC | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (565 aa) |
| | Daci_5977 | PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3767 glutathione S-transferase, N-terminal domain. (221 aa) |
| | gshB | KEGG: ajs:Ajs_3907 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family. (316 aa) |
| | leuS | TIGRFAM: leucyl-tRNA synthetase; KEGG: ajs:Ajs_3917 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (911 aa) |
| | Daci_6020 | Beta-alanine--pyruvate transaminase; PFAM: aminotransferase class-III; KEGG: ajs:Ajs_4103 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (506 aa) |
