STRINGSTRING
Daci_1674 Daci_1674 Daci_2910 Daci_2910 Daci_4226 Daci_4226 Daci_4057 Daci_4057 Daci_3373 Daci_3373 Daci_0450 Daci_0450 Daci_2909 Daci_2909
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_1674Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (380 aa)
Daci_2910PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2600 multicopper oxidase, type 3. (460 aa)
Daci_4226Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. (152 aa)
Daci_4057TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: aav:Aave_2223 ubiquinol oxidase, subunit II. (348 aa)
Daci_3373PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: art:Arth_4421 multicopper oxidase, type 3. (578 aa)
Daci_0450TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_1235 copper-resistance protein, CopA family. (633 aa)
Daci_2909PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type 1) copper domain protein. (163 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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