12 items (Delftia acidovorans) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	Daci_1170	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor. (356 aa)
	Daci_1450	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor. (440 aa)
	Daci_2952	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor. (319 aa)
	Daci_3269	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor. (336 aa)
	Daci_3272	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component. (327 aa)
	Daci_3275	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3492 Fe2+-dicitrate sensor, membrane component. (327 aa)
	Daci_3326	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR. (444 aa)
	Daci_3562	PFAM: FecR protein; KEGG: pfl:PFL_2292 sigma factor regulatory protein FecR. (323 aa)
	Daci_4751	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor. (344 aa)
	Daci_5853	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor. (375 aa)
	Daci_5891	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor. (327 aa)
	Daci_5894	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE0979 putative transmembrane sensor. (353 aa)

Your Current Organism:

Delftia acidovorans

NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daci_1170	Daci_1450	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	0.503
Daci_1170	Daci_3326	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR.	0.469
Daci_1450	Daci_1170	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xcb:XC_0557 transmembrane sensor.	0.503
Daci_1450	Daci_2952	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor.	0.490
Daci_1450	Daci_3269	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	0.497
Daci_1450	Daci_3272	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component.	0.495
Daci_1450	Daci_3275	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3492 Fe2+-dicitrate sensor, membrane component.	0.499
Daci_1450	Daci_3326	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR.	0.547
Daci_1450	Daci_3562	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	PFAM: FecR protein; KEGG: pfl:PFL_2292 sigma factor regulatory protein FecR.	0.500
Daci_1450	Daci_4751	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	0.490
Daci_1450	Daci_5853	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor.	0.482
Daci_1450	Daci_5891	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	0.500
Daci_1450	Daci_5894	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE0979 putative transmembrane sensor.	0.506
Daci_2952	Daci_1450	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	0.490
Daci_2952	Daci_3326	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pau:PA14_46650 putative transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR.	0.452
Daci_3269	Daci_1450	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	0.497
Daci_3269	Daci_3272	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component.	0.428
Daci_3269	Daci_3326	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppf:Pput_0896 anti-FecI sigma factor, FecR.	0.467
Daci_3272	Daci_1450	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component.	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor.	0.495
Daci_3272	Daci_3269	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_3484 Fe2+-dicitrate sensor, membrane component.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor.	0.428