STRINGSTRING
Daci_0695 Daci_0695 Daci_1340 Daci_1340 Daci_1529 Daci_1529 Daci_2875 Daci_2875 Daci_2967 Daci_2967 Daci_3137 Daci_3137 Daci_5563 Daci_5563 Daci_5964 Daci_5964
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daci_0695TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_0105 acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Daci_1340TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_0595 acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
Daci_1529PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
Daci_2875PFAM: pyruvate carboxyltransferase; KEGG: aav:Aave_1652 pyruvate carboxyltransferase. (329 aa)
Daci_2967PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_3685 pyruvate carboxyltransferase. (331 aa)
Daci_3137PFAM: pyruvate carboxyltransferase; KEGG: bam:Bamb_6280 pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (317 aa)
Daci_5563KEGG: ajs:Ajs_3548 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
Daci_5964PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3757 pyruvate carboxyltransferase. (313 aa)
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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