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| | Spea_0005 | PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: shn:Shewana3_0015 putative signal transduction protein. (354 aa) |
| | Spea_0032 | PFAM: Peptidoglycan-binding LysM; KEGG: slo:Shew_3735 peptidoglycan-binding LysM. (362 aa) |
| | Spea_0033 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: shw:Sputw3181_0026 DNA protecting protein DprA. (339 aa) |
| | Spea_0143 | TIGRFAM: general secretion pathway protein C; KEGG: slo:Shew_3620 general secretion pathway protein C. (305 aa) |
| | Spea_0144 | TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: slo:Shew_3619 general secretion pathway protein D. (710 aa) |
| | Spea_0145 | General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (523 aa) |
| | Spea_0146 | TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: slo:Shew_3617 general secretion pathway protein F. (407 aa) |
| | Spea_0147 | TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: slo:Shew_3616 general secretion pathway protein G. (144 aa) |
| | Spea_0148 | TIGRFAM: general secretion pathway protein H; KEGG: slo:Shew_3615 general secretion pathway protein H. (210 aa) |
| | Spea_0149 | TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: slo:Shew_3614 general secretion pathway protein I. (125 aa) |
| | Spea_0150 | TIGRFAM: general secretion pathway protein J; KEGG: sbl:Sbal_4200 general secretion pathway protein J. (241 aa) |
| | Spea_0151 | PFAM: General secretion pathway protein K; KEGG: slo:Shew_3612 general secretion pathway protein K. (326 aa) |
| | Spea_0152 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (397 aa) |
| | Spea_0153 | General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (158 aa) |
| | Spea_0154 | PFAM: type II secretion system protein N; KEGG: slo:Shew_3609 type II secretion system protein N. (252 aa) |
| | Spea_0233 | TIGRFAM: type IV pilus assembly protein PilM; KEGG: slo:Shew_0208 type IV pilus assembly protein PilM. (359 aa) |
| | Spea_0234 | PFAM: Fimbrial assembly family protein; KEGG: slo:Shew_0209 fimbrial assembly family protein. (193 aa) |
| | Spea_0235 | PFAM: Pilus assembly protein PilO; KEGG: sfr:Sfri_0372 pilus assembly protein, PilO. (206 aa) |
| | Spea_0236 | PFAM: Pilus assembly protein PilP; KEGG: slo:Shew_0211 pilus assembly protein, PilQ. (172 aa) |
| | Spea_0237 | TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: slo:Shew_0212 type IV pilus secretin PilQ. (688 aa) |
| | Spea_0332 | KEGG: sbl:Sbal_4042 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (506 aa) |
| | Spea_0407 | TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: slo:Shew_3444 mutator MutT protein. (129 aa) |
| | yacG | Protein of unknown function DUF329; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. (79 aa) |
| | zapD | Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. (244 aa) |
| | coaE | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (201 aa) |
| | Spea_0411 | Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (303 aa) |
| | Spea_0412 | PFAM: type II secretion system protein; KEGG: shn:Shewana3_0418 type II secretion system protein. (422 aa) |
| | Spea_0413 | TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: slo:Shew_3438 type IV-A pilus assembly ATPase PilB. (568 aa) |
| | Spea_0414 | KEGG: sbl:Sbal_3918 methylation site containing protein. (148 aa) |
| | Spea_0548 | KEGG: slo:Shew_3349 ATP-dependent protease La (LON) domain protein, putative. (197 aa) |
| | Spea_0574 | KEGG: sdn:Sden_0410 putative cation efflux protein. (243 aa) |
| | Spea_0986 | KEGG: slo:Shew_1018 hypothetical protein. (130 aa) |
| | Spea_1087 | TIGRFAM: type IV pilus modification protein PilV; KEGG: son:SO_3528 type IV pilus assembly protein PilV. (186 aa) |
| | Spea_1088 | KEGG: sbl:Sbal_1059 type IV pilus assembly protein PilW. (329 aa) |
| | Spea_1089 | KEGG: sbm:Shew185_1127 type IV pilus assembly protein PilX. (145 aa) |
| | Spea_1090 | KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative. (1194 aa) |
| | Spea_1091 | KEGG: shw:Sputw3181_3098 methylation site containing protein. (130 aa) |
| | Spea_1092 | KEGG: she:Shewmr4_2948 hypothetical protein. (83 aa) |
| | Spea_1093 | KEGG: sdn:Sden_2713 type IV pilus biogenesis protein, putative. (178 aa) |
| | Spea_1094 | KEGG: slo:Shew_1109 type IV pilus biogenesis protein, putative. (170 aa) |
| | Spea_1121 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (378 aa) |
| | Spea_1123 | KEGG: slo:Shew_1133 hypothetical protein. (144 aa) |
| | Spea_1124 | PFAM: protein of unknown function DUF167; KEGG: she:Shewmr4_1190 hypothetical protein; Belongs to the UPF0235 family. (90 aa) |
| | Spea_1125 | PFAM: protein of unknown function YGGT; KEGG: slo:Shew_1135 protein of unknown function YGGT. (182 aa) |
| | Spea_1127 | Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (233 aa) |
| | Spea_1128 | TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: slo:Shew_1138 twitching motility protein. (345 aa) |
| | Spea_1129 | KEGG: shw:Sputw3181_1326 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (370 aa) |
| | Spea_1176 | PFAM: response regulator receiver; KEGG: vha:VIBHAR_06171 hypothetical protein. (540 aa) |
| | rlmD | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (445 aa) |
| | Spea_1259 | PFAM: DNA repair protein RadC; KEGG: shm:Shewmr7_1776 DNA repair protein RadC; Belongs to the UPF0758 family. (158 aa) |
| | Spea_1291 | Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: slo:Shew_1277 putative signal transduction protein. (491 aa) |
| | rlmN | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (373 aa) |
| | Spea_1651 | PFAM: peptidase S49; Peptidase S49 domain protein; KEGG: shm:Shewmr7_1536 peptidase S49, N-terminal domain protein. (342 aa) |
| | Spea_1769 | TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sbm:Shew185_1667 DNA internalization-related competence protein ComEC/Rec2. (812 aa) |
| | Spea_1879 | KEGG: slo:Shew_2149 conserved hypothetical ABC transporter protein. (263 aa) |
| | Spea_1956 | KEGG: son:SO_4159 hypothetical protein. (189 aa) |
| | Spea_1966 | KEGG: slo:Shew_1837 hypothetical protein. (370 aa) |
| | Spea_2040 | Hypothetical protein; KEGG: shw:Sputw3181_3605 methylation site containing protein. (188 aa) |
| | Spea_2500 | Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily. (193 aa) |
| | Spea_2521 | KEGG: vfi:VF1617 hypothetical protein. (193 aa) |
| | Spea_2662 | KEGG: slo:Shew_2489 competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1. (105 aa) |
| | Spea_2701 | KEGG: sbl:Sbal_1586 hypothetical protein. (192 aa) |
| | Spea_2702 | KEGG: saz:Sama_1203 hypothetical protein. (200 aa) |
| | Spea_2703 | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein; KEGG: slo:Shew_2528 transcriptional regulator, CdaR. (383 aa) |
| | Spea_2704 | KEGG: vch:VC0502 type IV pilin, putative. (178 aa) |
| | Spea_2913 | KEGG: shw:Sputw3181_3641 hypothetical protein. (182 aa) |
| | Spea_3010 | Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: saz:Sama_1005 putative signal transduction protein. (280 aa) |
| | Spea_3028 | KEGG: hch:HCH_00820 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (332 aa) |
| | Spea_3031 | Type IV pilus assembly PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. (135 aa) |
| | miaB | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (475 aa) |
| | Spea_3165 | PFAM: protein of unknown function DUF152; KEGG: slo:Shew_2949 protein of unknown function DUF152; Belongs to the multicopper oxidase YfiH/RL5 family. (248 aa) |
| | Spea_3315 | KEGG: slo:Shew_3074 pilin, putative. (185 aa) |
| | Spea_3316 | KEGG: sfr:Sfri_3092 methylation site containing protein. (177 aa) |
| | Spea_3740 | PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sbm:Shew185_0512 peptidase U62 modulator of DNA gyrase. (460 aa) |
| | Spea_3747 | PFAM: peptidase U62 modulator of DNA gyrase; KEGG: slo:Shew_0410 peptidase U62, modulator of DNA gyrase. (493 aa) |
| | Spea_3748 | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spc:Sputcn32_0580 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (279 aa) |
| | Spea_3749 | KEGG: slo:Shew_0408 hypothetical protein. (1439 aa) |
| | Spea_3750 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: slo:Shew_0407 ribonuclease, Rne/Rng family. (502 aa) |
| | Spea_3751 | Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (198 aa) |
| | Spea_3755 | SMART: PA14-related domain protein; KEGG: slo:Shew_0402 MSHA biogenesis protein MshQ. (1382 aa) |
| | Spea_3756 | KEGG: slo:Shew_0401 MSHA biogenesis protein MshP. (166 aa) |
| | Spea_3757 | KEGG: slo:Shew_0400 methylation site containing protein. (295 aa) |
| | Spea_3758 | KEGG: shw:Sputw3181_3602 methylation site containing protein. (191 aa) |
| | Spea_3759 | KEGG: spc:Sputcn32_0569 MSHA pilin protein MshC. (158 aa) |
| | Spea_3760 | KEGG: shm:Shewmr7_0473 methylation site containing protein. (176 aa) |
| | Spea_3761 | KEGG: son:SO_4105 MSHA pilin protein MshA. (178 aa) |
| | Spea_3762 | KEGG: shn:Shewana3_3657 methylation site containing protein. (202 aa) |
| | Spea_3763 | KEGG: shn:Shewana3_3658 hypothetical protein. (163 aa) |
| | Spea_3764 | PFAM: type II secretion system protein; KEGG: shw:Sputw3181_3608 type II secretion system protein. (406 aa) |
| | Spea_3765 | PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: slo:Shew_0392 type II secretion system protein E. (577 aa) |
| | Spea_3766 | PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: she:Shewmr4_3484 tetratricopeptide TPR_2 repeat protein. (428 aa) |
| | Spea_3767 | KEGG: sbm:Shew185_0485 MSHA biogenesis protein MshM. (302 aa) |
| | Spea_3768 | TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB short domain; KEGG: slo:Shew_0389 pilus (MSHA type) biogenesis protein MshL. (556 aa) |
| | Spea_3769 | Hypothetical protein; KEGG: shn:Shewana3_3664 MSHA biogenesis protein MshK. (112 aa) |
| | Spea_3770 | KEGG: slo:Shew_0387 MSHA biogenesis protein MshJ. (218 aa) |
| | Spea_3771 | PFAM: Fimbrial assembly family protein; KEGG: slo:Shew_0386 fimbrial assembly family protein. (202 aa) |
| | Spea_3772 | KEGG: sbm:Shew185_0480 conserved hypothetical biogenesis protein MshI. (293 aa) |
| | Spea_3837 | PFAM: DNA repair protein RadC; KEGG: slo:Shew_3481 DNA repair protein RadC; Belongs to the UPF0758 family. (225 aa) |
| | Spea_4012 | KEGG: shw:Sputw3181_0113 competence protein ComF. (249 aa) |
| | Spea_4255 | KEGG: slo:Shew_0364 MshA, mannose-sensitive haemaglutinin. (176 aa) |
