STRINGSTRING
Spea_0337 Spea_0337 Spea_1322 Spea_1322 Spea_1338 Spea_1338 Spea_1339 Spea_1339 Spea_1379 Spea_1379 Spea_1380 Spea_1380 Spea_1381 Spea_1381 cheB cheB Spea_1385 Spea_1385 Spea_1386 Spea_1386 Spea_1463 Spea_1463 Spea_1860 Spea_1860 Spea_1901 Spea_1901 Spea_2398 Spea_2398 Spea_3023 Spea_3023 Spea_3730 Spea_3730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spea_0337TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: vpa:VPA0596 putative methyl-accepting chemotaxis protein. (517 aa)
Spea_1322PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_1310 methyl-accepting chemotaxis sensory transducer. (667 aa)
Spea_1338PFAM: response regulator receiver; CheW domain protein; KEGG: shw:Sputw3181_1404 putative CheW protein. (306 aa)
Spea_1339PFAM: MCP methyltransferase CheR-type; KEGG: shn:Shewana3_1320 MCP methyltransferase, CheR-type. (277 aa)
Spea_1379PFAM: response regulator receiver; KEGG: slo:Shew_1384 response regulator receiver protein. (135 aa)
Spea_1380Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (245 aa)
Spea_1381CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: slo:Shew_1386 CheA signal transduction histidine kinase. (741 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (393 aa)
Spea_1385PFAM: CheW domain protein; KEGG: slo:Shew_1390 CheW protein. (305 aa)
Spea_1386PFAM: CheW domain protein; KEGG: slo:Shew_1391 CheW protein. (163 aa)
Spea_1463PFAM: response regulator receiver; CheW domain protein; KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein. (308 aa)
Spea_1860TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: slo:Shew_2159 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor. (524 aa)
Spea_1901PFAM: response regulator receiver; CheW domain protein; KEGG: shn:Shewana3_2462 response regulator receiver modulated CheW protein. (314 aa)
Spea_2398PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: ppr:PBPRA0989 hypothetical methyl-accepting chemotaxis protein. (656 aa)
Spea_3023TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: shm:Shewmr7_2891 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor. (514 aa)
Spea_3730PFAM: response regulator receiver; KEGG: shw:Sputw3181_0617 response regulator receiver protein. (265 aa)
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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