STRINGSTRING
Spea_0286 Spea_0286 Spea_0302 Spea_0302 Spea_0335 Spea_0335 Spea_0553 Spea_0553 Spea_0628 Spea_0628 Spea_0629 Spea_0629 Spea_0701 Spea_0701 Spea_0720 Spea_0720 Spea_0733 Spea_0733 Spea_0829 Spea_0829 Spea_0878 Spea_0878 Spea_0908 Spea_0908 Spea_0909 Spea_0909 Spea_1176 Spea_1176 Spea_1177 Spea_1177 Spea_1180 Spea_1180 Spea_1338 Spea_1338 Spea_1359 Spea_1359 Spea_1379 Spea_1379 cheB cheB Spea_1391 Spea_1391 Spea_1432 Spea_1432 Spea_1434 Spea_1434 Spea_1435 Spea_1435 Spea_1463 Spea_1463 Spea_1479 Spea_1479 Spea_1684 Spea_1684 Spea_1733 Spea_1733 Spea_1746 Spea_1746 Spea_1756 Spea_1756 Spea_1810 Spea_1810 Spea_1901 Spea_1901 Spea_1953 Spea_1953 Spea_2088 Spea_2088 Spea_2236 Spea_2236 Spea_2299 Spea_2299 Spea_2375 Spea_2375 Spea_2377 Spea_2377 Spea_2518 Spea_2518 Spea_2554 Spea_2554 Spea_2557 Spea_2557 Spea_2809 Spea_2809 Spea_2935 Spea_2935 Spea_2969 Spea_2969 Spea_3041 Spea_3041 Spea_3345 Spea_3345 Spea_3347 Spea_3347 Spea_3361 Spea_3361 Spea_3511 Spea_3511 Spea_3577 Spea_3577 Spea_3601 Spea_3601 Spea_3630 Spea_3630 Spea_3702 Spea_3702 Spea_3710 Spea_3710 Spea_3730 Spea_3730 ntrC ntrC Spea_3933 Spea_3933 Spea_4017 Spea_4017 Spea_4093 Spea_4093 Spea_4110 Spea_4110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spea_0286Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: vfi:VFA1016 sensory transduction protein kinase. (885 aa)
Spea_0302PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: vha:VIBHAR_05599 hypothetical protein. (400 aa)
Spea_0335Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vha:VIBHAR_05570 hypothetical protein. (222 aa)
Spea_0553Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: sfr:Sfri_1844 response regulator receiver protein. (179 aa)
Spea_0628KEGG: slo:Shew_3200 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1765 aa)
Spea_0629PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: slo:Shew_3199 response regulator receiver modulated metal dependent phosphohydrolase. (339 aa)
Spea_0701Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: shn:Shewana3_0468 putative transcriptional regulator, CadC. (308 aa)
Spea_0720Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sfr:Sfri_3688 two component, sigma54 specific, transcriptional regulator, fis family protein. (460 aa)
Spea_0733Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0777 two component transcriptional regulator, winged helix family. (238 aa)
Spea_0829PFAM: regulatory protein LuxR; response regulator receiver; KEGG: slo:Shew_0842 two component transcriptional regulator, LuxR family. (209 aa)
Spea_0878Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0896 two component transcriptional regulator, winged helix family. (237 aa)
Spea_0908PFAM: EAL domain protein; response regulator receiver; KEGG: aha:AHA_0909 response regulator. (405 aa)
Spea_0909Hpt sensor hybrid histidine kinase; PFAM: extracellular solute-binding protein family 3; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator. (1333 aa)
Spea_1176PFAM: response regulator receiver; KEGG: vha:VIBHAR_06171 hypothetical protein. (540 aa)
Spea_1177Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: vha:VIBHAR_06169 hypothetical protein. (746 aa)
Spea_1180Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: slo:Shew_1200 multi-sensor hybrid histidine kinase. (929 aa)
Spea_1338PFAM: response regulator receiver; CheW domain protein; KEGG: shw:Sputw3181_1404 putative CheW protein. (306 aa)
Spea_1359Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sfr:Sfri_1180 two component, sigma54 specific, transcriptional regulator, fis family protein. (450 aa)
Spea_1379PFAM: response regulator receiver; KEGG: slo:Shew_1384 response regulator receiver protein. (135 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (393 aa)
Spea_1391PFAM: response regulator receiver; KEGG: slo:Shew_1396 response regulator receiver protein. (368 aa)
Spea_1432PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: shn:Shewana3_2013 response regulator receiver modulated serine phosphatase. (407 aa)
Spea_1434Multi-sensor hybrid histidine kinase; KEGG: shn:Shewana3_2015 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1186 aa)
Spea_1435Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: shn:Shewana3_2016 two component, sigma54 specific, transcriptional regulator, fis family. (498 aa)
Spea_1463PFAM: response regulator receiver; CheW domain protein; KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein. (308 aa)
Spea_1479PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sbm:Shew185_1658 two component transcriptional regulator, LytTR family. (236 aa)
Spea_1684TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: saz:Sama_1511 response regulator receiver protein. (400 aa)
Spea_1733PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family. (210 aa)
Spea_1746Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_2348 two component transcriptional regulator, winged helix family. (224 aa)
Spea_1756Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: slo:Shew_2341 two component, sigma54 specific, transcriptional regulator, fis family. (450 aa)
Spea_1810PFAM: ANTAR domain protein; KEGG: sfr:Sfri_1508 response regulator receiver and ANTAR domain protein. (196 aa)
Spea_1901PFAM: response regulator receiver; CheW domain protein; KEGG: shn:Shewana3_2462 response regulator receiver modulated CheW protein. (314 aa)
Spea_1953Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1824 two component transcriptional regulator, LuxR family. (214 aa)
Spea_2088Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1969 two component transcriptional regulator, LuxR family. (199 aa)
Spea_2236Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_2426 DNA-binding response regulator. (227 aa)
Spea_2299Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: saz:Sama_1873 response regulator receiver protein. (221 aa)
Spea_2375Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: vfi:VFA0360 sensory transduction protein kinase. (806 aa)
Spea_2377PFAM: response regulator receiver; KEGG: slo:Shew_0703 response regulator receiver protein. (120 aa)
Spea_2518Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_1791 two component transcriptional regulator, winged helix family. (230 aa)
Spea_2554Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1545 two component transcriptional regulator, LuxR family. (219 aa)
Spea_2557Histidine kinase; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slo:Shew_1534 integral membrane sensor hybrid histidine kinase. (1142 aa)
Spea_2809Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_5111 DNA-binding response regulator ColR, putative. (225 aa)
Spea_2935Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_4647 DNA-binding response regulator. (229 aa)
Spea_2969Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_2749 two component transcriptional regulator, winged helix family. (229 aa)
Spea_3041Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: shw:Sputw3181_3638 response regulator receiver protein. (203 aa)
Spea_3345Hpt sensor hybrid histidine kinase; TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sfr:Sfri_1992 multi-sensor hybrid histidine kinase. (1038 aa)
Spea_3347Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sfr:Sfri_1990 two component transcriptional regulator, winged helix family protein. (236 aa)
Spea_3361Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: slo:Shew_0726 two component, sigma54 specific, transcriptional regulator, fis family. (509 aa)
Spea_3511Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0583 two component transcriptional regulator, winged helix family. (224 aa)
Spea_3577Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_4623 DNA-binding response regulator. (224 aa)
Spea_3601PFAM: response regulator receiver; KEGG: vha:VIBHAR_05158 hypothetical protein. (224 aa)
Spea_3630Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_3317 two component transcriptional regulator, winged helix family. (233 aa)
Spea_3702KEGG: slo:Shew_0459 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1234 aa)
Spea_3710CheC, inhibitor of MCP methylation; PFAM: response regulator receiver; KEGG: slo:Shew_0453 response regulator receiver protein. (331 aa)
Spea_3730PFAM: response regulator receiver; KEGG: shw:Sputw3181_0617 response regulator receiver protein. (265 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa)
Spea_3933Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_3570 two component transcriptional regulator, winged helix family. (227 aa)
Spea_4017Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_3637 two component transcriptional regulator, winged helix family. (241 aa)
Spea_4093Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: slo:Shew_3682 two component, sigma54 specific, transcriptional regulator, fis family. (457 aa)
Spea_4110Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0097 two component transcriptional regulator, winged helix family. (225 aa)
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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