STRINGSTRING
Spea_0570 Spea_0570 Spea_0707 Spea_0707 Spea_0891 Spea_0891 Spea_0921 Spea_0921 Spea_1454 Spea_1454 Spea_1813 Spea_1813 Spea_1912 Spea_1912 Spea_2113 Spea_2113 Spea_2115 Spea_2115 Spea_2122 Spea_2122 Spea_2190 Spea_2190 Spea_2271 Spea_2271 Spea_2279 Spea_2279 Spea_2388 Spea_2388 Spea_2768 Spea_2768 Spea_3419 Spea_3419 Spea_3634 Spea_3634 Spea_3785 Spea_3785 Spea_3956 Spea_3956 Spea_4043 Spea_4043
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spea_0570PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0534 major facilitator superfamily MFS_1. (455 aa)
Spea_0707PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2000 major facilitator superfamily MFS_1. (394 aa)
Spea_0891PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0920 major facilitator superfamily MFS_1. (510 aa)
Spea_0921PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0953 major facilitator superfamily MFS_1. (395 aa)
Spea_1454PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_1441 major facilitator superfamily MFS_1. (409 aa)
Spea_1813TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sfr:Sfri_1511 nitrite transporter. (488 aa)
Spea_1912TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_1777 drug resistance transporter, Bcr/CflA subfamily. (408 aa)
Spea_2113TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_2001 drug resistance transporter, Bcr/CflA subfamily. (414 aa)
Spea_2115PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pha:PSHAa2144 transporter. (451 aa)
Spea_2122PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa2136 transporter. (461 aa)
Spea_2190TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: vvy:VVA0679 permease. (514 aa)
Spea_2271PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3963 conserved integral membrane protein. (393 aa)
Spea_2279PFAM: major facilitator superfamily MFS_1; KEGG: vfi:VFA0067 oxalate/formate antiporter. (404 aa)
Spea_2388PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_2104 major facilitator superfamily MFS_1. (573 aa)
Spea_2768PFAM: major facilitator superfamily MFS_1; KEGG: vha:VIBHAR_04810 hypothetical protein. (399 aa)
Spea_3419PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1047 transporter of the MFS superfamily. (416 aa)
Spea_3634PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa1259 transport protein of the major facilitator. (389 aa)
Spea_3785PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_2502 major facilitator superfamily MFS_1. (390 aa)
Spea_3956TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_3948 drug resistance transporter, Bcr/CflA subfamily. (400 aa)
Spea_4043PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: slo:Shew_2681 general substrate transporter. (452 aa)
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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