STRINGSTRING
Spea_2904 Spea_2904 Spea_1231 Spea_1231 Spea_1726 Spea_1726
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spea_2904PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_1429 beta-lactamase domain protein. (661 aa)
Spea_1231PFAM: beta-lactamase domain protein; KEGG: pfo:Pfl_2280 beta-lactamase-like. (670 aa)
Spea_1726PFAM: beta-lactamase domain protein; KEGG: vvy:VVA1356 alkyl sulfatase. (683 aa)
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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