STRINGSTRING
Spea_3014 Spea_3014 Spea_1102 Spea_1102 Spea_1523 Spea_1523 Spea_2187 Spea_2187 Spea_2857 Spea_2857 Spea_2858 Spea_2858 pyrC pyrC Spea_3243 Spea_3243 Spea_3872 Spea_3872
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spea_3014PFAM: amidohydrolase; KEGG: slo:Shew_0983 amidohydrolase. (459 aa)
Spea_1102KEGG: son:SO_3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. NagA family. (377 aa)
Spea_1523KEGG: pha:PSHAb0157 putative N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. NagA family. (378 aa)
Spea_2187PFAM: Amidohydrolase 3; KEGG: ppr:PBPRB1375 putative cytosine deaminase. (431 aa)
Spea_2857PFAM: amidohydrolase; KEGG: slo:Shew_2586 amidohydrolase. (1010 aa)
Spea_2858KEGG: slo:Shew_2587 hypothetical protein. (467 aa)
pyrCDihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (345 aa)
Spea_3243Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (454 aa)
Spea_3872PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vha:VIBHAR_06184 hypothetical protein. (419 aa)
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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