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Dshi_0026 Dshi_0026 Dshi_0066 Dshi_0066 adhI adhI hbdA hbdA Dshi_0220 Dshi_0220 nadX nadX adh adh Dshi_0248 Dshi_0248 fabG3 fabG3 Dshi_0371 Dshi_0371 Dshi_0473 Dshi_0473 xylD xylD Dshi_0553 Dshi_0553 rbtD rbtD Dshi_0590 Dshi_0590 Dshi_0598 Dshi_0598 fabG2 fabG2 Dshi_0643 Dshi_0643 Dshi_0672 Dshi_0672 kefC kefC Dshi_0826 Dshi_0826 fadJ fadJ Dshi_0890 Dshi_0890 Dshi_0930 Dshi_0930 adhA adhA mtlK mtlK Dshi_0970 Dshi_0970 serA2 serA2 fabI1 fabI1 Dshi_1049 Dshi_1049 Dshi_1078 Dshi_1078 Dshi_1155 Dshi_1155 panE panE Dshi_1222 Dshi_1222 pntA pntA Dshi_1243 Dshi_1243 melA melA Dshi_1254 Dshi_1254 Dshi_1258 Dshi_1258 idhA idhA Dshi_1270 Dshi_1270 Dshi_1272 Dshi_1272 folD folD Dshi_1339 Dshi_1339 Dshi_1358 Dshi_1358 Dshi_1429 Dshi_1429 dxr dxr Dshi_1544 Dshi_1544 trkA trkA cysG cysG zwf zwf Dshi_1700 Dshi_1700 gap2 gap2 gap1 gap1 mmsB mmsB argC argC fabI2 fabI2 algD algD Dshi_1954 Dshi_1954 Dshi_1955 Dshi_1955 Dshi_1956 Dshi_1956 Dshi_1958 Dshi_1958 Dshi_1963 Dshi_1963 Dshi_2035 Dshi_2035 Dshi_2036 Dshi_2036 Dshi_2058 Dshi_2058 Dshi_2135 Dshi_2135 Dshi_2182 Dshi_2182 Dshi_2239 Dshi_2239 Dshi_2273 Dshi_2273 Dshi_2310 Dshi_2310 Dshi_2319 Dshi_2319 ilvC ilvC Dshi_2436 Dshi_2436 Dshi_2443 Dshi_2443 Dshi_2480 Dshi_2480 sucD2 sucD2 Dshi_2574 Dshi_2574 Dshi_2608 Dshi_2608 Dshi_2643 Dshi_2643 proC proC gap3 gap3 Dshi_2759 Dshi_2759 Dshi_2776 Dshi_2776 Dshi_2825 Dshi_2825 Dshi_2849 Dshi_2849 Dshi_2853 Dshi_2853 mdh mdh sucD1 sucD1 Dshi_2891 Dshi_2891 tyrC tyrC xdhC xdhC gyaR gyaR Dshi_2983 Dshi_2983 dapB dapB glxR glxR Dshi_3049 Dshi_3049 fabG1 fabG1 asd asd Dshi_3291 Dshi_3291 serA1 serA1 Dshi_3394 Dshi_3394 gpsA gpsA ahcY ahcY aroE aroE maeB maeB bchC bchC Dshi_3590 Dshi_3590
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Dshi_0026KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase, best swissprot hit to Flavin reductase (FR) (NADPH-dependent diaphorase) from Mus musculus. (213 aa)
Dshi_0066PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein KEGG: sil:SPO3440 20-beta-hydroxysteroid dehydrogenase, putative, BLAST hits to several dehydrogenase proteins: swissprot hit to Uncharacterized oxidoreductase SSP1627 from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (Belongs to the short-chain dehydrogenases/reductases (SDR) family and ref hits to 20-beta-hydroxysteroid dehydrogenase, putative from Silicibacter pomeroyi DSS-3. (252 aa)
adhITIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: sil:SPOA0272 glutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
hbdAPFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding KEGG: sil:SPO0717 3-hydroxybutyryl-CoA dehydrogenase; high swissprot, good RBS site AGGAT. (291 aa)
Dshi_0220Putative oxidoreductase NAD-/NADP-dependent; PFAM: short-chain dehydrogenase/reductase SDR KEGG: rde:RD1_1391 oxidoreductase, putative. (277 aa)
nadXPFAM: aspartate dehydrogenase; homoserine dehydrogenase NAD-binding KEGG: mes:Meso_0824 aspartate dehydrogenase. (253 aa)
adhTIGRFAM: alanine dehydrogenase PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein KEGG: sit:TM1040_3628 alanine dehydrogenase; high swissprot; Belongs to the AlaDH/PNT family. (371 aa)
Dshi_0248TIGRFAM: Quinone oxidoreductase putative PIG3 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: rsq:Rsph17025_2435 alcohol dehydrogenase, zinc-binding domain protein. (328 aa)
fabG3PFAM: short-chain dehydrogenase/reductase SDR, good swissprot hit to Protein fixR from Bradyrhizobium japonicum, fabG NCBI domain, good Ref ZP hit toShort-chain alcohol dehydrogenase from Rhodobacterales bacterium HTCC2150. (243 aa)
Dshi_0371PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; middle swissprot hit to Uncharacterized oxidoreductase MXAN_5909 from Myxococcus xanthus DK 1622, good Ref ZP hit to Short-chain dehydrogenase/reductase family member from Loktanella vestfoldensis SKA53; NCBI conserved domains: COG4221, Short-chain alcohol dehydrogenase of unknown specificity. (243 aa)
Dshi_0473TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; high swissprot hit to Alcohol dehydrogenase class-3 from Rhodobacter sphaeroides 2.4.1; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
xylDD-xylulose reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; high swissprot hit to Putative D-xylulose reductase from Sinorhizobium meliloti; high gb hit to D-xylulose reductase, putative [Hoeflea phototrophica DFL-43]; Xylitol dehydrogenase. (347 aa)
Dshi_0553PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NCBI conserved domains: PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; middle swissprot hit to3-oxoacyl-[acyl-carrier-protein] reductase from Bacillus subtilis; good ref ZP hit to Short-chain dehydrogenase/reductase SDR [Synechococcus sp. WH 5701]. (255 aa)
rbtDRibitol 2-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; high swissprot hit to Ribitol 2-dehydrogenase (RDH) from Klebsiella aerogenes; high Ref YP hit to probable ribitol 2-dehydrogenase protein [Rhizobium etli CFN 42]; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)
Dshi_0590PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; middle swissprot hit to Putative 2-hydroxyacid dehydrogenase ycdW from Escherichia coli K12; high Ref ZP hit to D-isomer specific 2-hydroxyacid dehydrogenase family protein from Roseovarius sp. 217. (311 aa)
Dshi_0598PFAM: short-chain dehydrogenase/reductase SDR; NCBI conserved domains: PRK09009, C factor cell-cell signaling protein and PRK06953, short chain dehydrogenase; low swissprot hit to C-factor (C signal) from Myxococcus xanthus; high Ref YP hit to C factor, cell signaling protein, putative [Roseobacter denitrificans OCh 114]. (221 aa)
fabG2PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NCBI conserved domains: fabG; middle swissprot hit to 3-oxoacyl-[acyl-carrier-protein] reductase from Chlamydia trachomatis; high Ref ZP hit to oxidoreductase [Rhodobacterales bacterium HTCC2150]. (250 aa)
Dshi_0643PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NCBI conserved domains: PRK09134, short chain dehydrogenase; middle swissprot hit to 3-oxoacyl-[acyl-carrier-protein] reductase from Staphylococcus epidermidis ATCC 12228; high Ref ZP hit to short chain dehydrogenase [Roseobacter sp. AzwK-3b]. (263 aa)
Dshi_0672PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; low swissprot hit to 7-alpha-hydroxysteroid dehydrogenase from Escherichia coli K12; high Ref ZP hit to 7-alpha-hydroxysteroid dehydrogenase, putative [Roseovarius nubinhibens ISM]. (268 aa)
kefCPotassium efflux system protein; Glutathione regulated, K+/H+ antiporter, NAD-binding domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (670 aa)
Dshi_0826Malic protein NAD-binding; Malate decarboxylase, NAD(P) dependent(two forms of the enzyme with different kinetics), Reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH. (759 aa)
fadJ3-hydroxyacyl-CoA dehydrogenase NAD-binding; Multifunctional enzyme: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase, Reaction: (3S)-3-Hydroxyacyl-CoA <=> trans-2,3-Dehydroacyl-CoA + H2O, Reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA; 3-hydroxyacyl-CoA dehydrogenase, Reaction(EC:1.1.1.35):(3S)-3-Hydroxyacyl-CoA + NAD+ <=> 3-Oxoacyl-CoA + NADH + H+. (737 aa)
Dshi_0890Catalyses the deamination of ornithine to proline, Reaction: L-Ornithine <=> L-Proline + NH3. (330 aa)
Dshi_0930Sodium/hydrogen exchanger; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (575 aa)
adhAAlcohol dehydrogenase GroES domain protein; Zinc-containing alcohol dehydrogenase family, Reaction: An alcohol + NAD+ <=> an aldehyde or ketone + NADH. (339 aa)
mtlKMannitol dehydrogenase domain protein; Reaction: D-mannitol + NAD+ <=> D-fructose + NADH. (499 aa)
Dshi_0970Short-chain dehydrogenase/reductase SDR; N-terminal truncated. (163 aa)
serA2D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding, Reaction: 2-hydroxyglutarate + NAD+ <=> 2-oxoglutarate + NADH; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (316 aa)
fabI1Enoyl-(acyl-carrier-protein) reductase; Substrate: acyl-carrier-protein (ACP), Reaction: Acyl-ACP + NAD+ = trans-2,3-dehydroacyl-ACP + NADH. (262 aa)
Dshi_1049Short-chain dehydrogenase/reductase SDR; Large family of oxidoreductases; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)
Dshi_1078Alcohol dehydrogenase zinc-binding domain protein; Reaction: An alcohol + NAD+ = an aldehyde or ketone + NADH. (345 aa)
Dshi_1155uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (461 aa)
panE2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (325 aa)
Dshi_1222Short-chain dehydrogenase/reductase SDR; Most enzymes of this family are NAD/NADP-dependent oxidoreductases. (247 aa)
pntANAD(P) transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. (538 aa)
Dshi_1243Short-chain dehydrogenase/reductase SDR; Large family of oxidoreductases, NAD, NADP-dependent. (258 aa)
melAGlycoside hydrolase family 4 protein, Hydrolysis of terminal, non-reducing alpha-D-galactose residues, NAD and Mn-dependent. (446 aa)
Dshi_1254Glyceraldehyde-3-phosphate dehydrogenase; Tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis; type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)
Dshi_1258Short-chain dehydrogenase/reductase SDR; Most enzymes of this family are NAD/NADP-dependent oxidoreductases. (247 aa)
idhAInositol 2-dehydrogenase; Carbohydrate degradation. (327 aa)
Dshi_1270Oxidoreductase domain protein; NAD-dependent oxidoreductase. (372 aa)
Dshi_1272Oxidoreductase domain protein; NAD-dependent oxidoreductase. (377 aa)
folDNADP(+) dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (299 aa)
Dshi_1339Short-chain dehydrogenase/reductase SDR; Most enzymes of this family are NAD/NADP-dependent oxidoreductases. (259 aa)
Dshi_1358Short-chain dehydrogenase/reductase SDR; Most enzymes of this family are NAD/NADP-dependent oxidoreductases. (258 aa)
Dshi_1429Short-chain dehydrogenase/reductase SDR; Large family of oxidoreductases, NAD, NADP-dependent. (256 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (393 aa)
Dshi_1544Short-chain dehydrogenase/reductase family protein; SWISSPROT P99093: 3-oxoacyl-[acyl-carrier-protein] reductase fabG; TIGRFAM: TIGR01963 3-hydroxybutyrate dehydrogenase; PRINTS: PR00080, PR00081; PANTHER: PTHR19410, PFAM: PF00106 short chain dehydrogenase/reductase, SUPERFAMILY: SSF51735, Gene3D: G3DSA:3.40.50.720, COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (257 aa)
trkATrk system potassium uptake protein; SWISSPROT: P0AGI8 - NAD(P)-binding Rossmann-fold domains; COG: COG0569 - K+ transport systems, NAD-binding component; PFAM: PF02254, PF02080; SUPERFAMILY: SSF51735, Gene3D: G3DSA:3.40.50.720. (458 aa)
cysGSiroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (464 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (484 aa)
Dshi_1700Short-chain dehydrogenase/reductase family protein; PFAM: PF00106-short chain dehydrogenase; PROSITE: PS00061-Short-chain dehydrogenases/reductases family signature; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (251 aa)
gap2SWISSPROT P00362: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: TIGR01534 glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057 - Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; PFAM: pfam02800 pfam00044; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (333 aa)
gap1SWISSPROT P00362: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: TIGR01534 glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057 - Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; PFAM: pfam02800 pfam00044; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)
mmsBTIGRFAM: TIGR01692 3-hydroxyisobutyrate dehydrogenase; PANTHER: PTHR22981; PROSITE: PS00895; PFAM: PF03446; Gene3D: G3DSA:1.10.1040.10; Belongs to the HIBADH-related family. (291 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (341 aa)
fabI2SWISSPROT O24990: Enoyl-[acyl-carrier-protein] reductase [NADH]; COG: COG0623 - Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: PF00106; SPRINT: PR00081. (272 aa)
algDSWISSPROT P11759: GDP-mannose 6-dehydrogenase; COG: COG1004 - Predicted UDP-glucose 6-dehydrogenase; PROSITE: PS00059; PFAM: PF03721, PF00984, PF03720. (469 aa)
Dshi_1954Putative short-chain dehydrogenase; PFAM: PF00106-short chain dehydrogenase; PRINTS: PR00081; COG: COG0300 - Short-chain dehydrogenases of various substrate specificities. (267 aa)
Dshi_1955Putative short-chain dehydrogenase; PFAM: PF00106, PF01370; PRINTS: PR00081; Gene3D: G3DSA:3.40.50.720; COG: COG1028 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (598 aa)
Dshi_1956Putative NAD-dependent epimerase/dehydratase; PFAM: PF01370; COG: COG0451 - Nucleoside-diphosphate-sugar epimerases. (320 aa)
Dshi_1958Putative NAD-dependent epimerase/dehydratase; COG: COG0451 - Nucleoside-diphosphate-sugar epimerases; PFAM: PF01370; PROSITE: PS00178, PS00061; Gene3D: G3DSA:3.40.50.720. (880 aa)
Dshi_1963Putative modular PKS system; SWISSPROT: Q03131: Erythronolide synthase, modules 1 and 2; Q03132: Erythronolide synthase, modules 3 and 4; PFAM: PF03060, PF08659, PF00109, PF02801, PF00698; TIGRFAM: TIGR02813 polyketide-type polyunsaturated fatty acid synthase PfaA; COG: COG3321 - Polyketide synthase modules and related proteins. (2553 aa)
Dshi_2035Putative gluconate 5-dehydrogenase; COG: COG1028 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); PFAM: PF00106; PROSITE: PS00061; PRINTS: PR00080, PR00081. (254 aa)
Dshi_2036Zinc-containing alcohol dehydrogenase; PFAM: PF00107, PF08240; SUPERFAMILY: SSF50129; PANTHER: PTHR11695: Alcohol dehydrogenase related. (327 aa)
Dshi_2058Short chain dehydrogenase / reductase; COG: COG1028 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (221 aa)
Dshi_2135COG: COG4221 - Short-chain alcohol dehydrogenase of unknown specificity; PFAM: PF00106; PRINTS: PR00081. (221 aa)
Dshi_2182Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
Dshi_2239Short-chain dehydrogenase/reductase SDR; Swiss-Prot: P50199 Gluconate 5-dehydrogenase (SDR family protein) PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein KEGG: jan:Jann_1106 short-chain dehydrogenase/reductase SDR. (250 aa)
Dshi_2273Swiss-Prot: P29365 - Homoserine dehydrogenase PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding KEGG: sil:SPO1734 homoserine dehydrogenase. (428 aa)
Dshi_2310Swiss-Prot: Q8FVE4-Ornithine cyclodeaminase arcB PFAM: ornithine cyclodeaminase/mu-crystallin KEGG: rde:RD1_1415 ornithine cyclodeaminase. (357 aa)
Dshi_2319Putative quinone oxidoreductase; Swiss-Prot: P26646-Protein yhdH TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH. (328 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (340 aa)
Dshi_2436Short-chain dehydrogenase/reductase; Swiss-Prot: P40747-Uncharacterized oxidoreductase yuxG TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein KEGG: jan:Jann_2592 short-chain dehydrogenase/reductase SDR COG3347: Uncharacterized conserved protein. (700 aa)
Dshi_2443PTHR22981: 3-hydroxyisobutyrate dehydrogenase-related COG2084: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases KEGG: sil:SPO2416 3-hydroxyisobutyrate dehydrogenase family protein; no well-defined Swiss-Prot hits: P0ABQ2, P28811, O34948. (289 aa)
Dshi_2480PFAM: short-chain dehydrogenase/reductase SDR COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (286 aa)
sucD2ADP-forming succinyl-CoA ligase; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (299 aa)
Dshi_2574PFAM: CoA-binding domain protein KEGG: sil:SPO1153 CoA-binding domain protein. (161 aa)
Dshi_2608Swiss-Prot: P49305-Putative oxidoreductase ORF334 / Q07982-Glucose--fructose oxidoreductase [Precursor] PFAM: oxidoreductase domain protein; Oxidoreductase domain KEGG: sit:TM1040_0565 oxidoreductase-like. (328 aa)
Dshi_2643Swiss-Prot: P36234-Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (316 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (273 aa)
gap3Swiss-Prot: P09124-Glyceraldehyde-3-phosphate dehydrogenase 1 PFAM: glyceraldehyde 3-phosphate dehydrogenase TIGR01534 glyceraldehyde-3-phosphate dehydrogenase, type I; phosphorylating; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (329 aa)
Dshi_2759Swiss-Prot: O05389-Putative oxidoreductase yrbE PFAM: oxidoreductase domain protein; Oxidoreductase domain COG0673: Predicted dehydrogenases and related proteins. (373 aa)
Dshi_2776Swiss-Prot: P12311-Alcohol dehydrogenase PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (319 aa)
Dshi_2825Hypothetical protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding COG1250: 3-hydroxyacyl-CoA dehydrogenase; related to 3-hydroxyacyl-CoA dehydrogenase. (391 aa)
Dshi_2849Short-chain dehydrogenase/reductase; Swiss-Prot: Q9KWN1-Serine 3-dehydrogenase PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR COG4221: Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (243 aa)
Dshi_2853Alcohol dehydrogenase; TIGRFAM: crotonyl-CoA reductase PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein Swiss-Prot: P42328-Alcohol dehydrogenase. (430 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (320 aa)
sucD1succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (293 aa)
Dshi_2891Short chain dehydrogenase/reductase; COG: COG1028 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); PFAM: PF00106; PRINTS: PR00080, PR00081. (242 aa)
tyrCArogenate dehydrogenase; SWISSPROT Q04983: Protein tyrC; COG: COG0287 - Prephenate dehydrogenase; PFAM: PF02153; PROSITE: PS51176. (313 aa)
xdhCTIGRFAM: TIGR02964 xanthine dehydrogenase accessory protein XdhC; PFAM: PF02625; COG: COG1975 - Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family. (320 aa)
gyaRGlyoxylate reductase; COG: COG1052 - Lactate dehydrogenase and related dehydrogenases; PFAM: PF00389, PF02826; PROSITE: PS00065, PS00671; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (328 aa)
Dshi_2983Hypothetical protein; COG:COG2130 - Putative NADP-dependent oxidoreductases; PFAM: PF00107; SUPERFAMILY: SSF50129; PANTHER: Alcohol dehydrogenase related; related to zinc-binding dehydrogenase. (332 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (269 aa)
glxR2-hydroxy-3-oxopropionate reductase; COG2084 MmsB - 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases PFAM: oxidoreductase domain protein; 6-phosphogluconate dehydrogenase NAD-binding KEGG: jan:Jann_3485 3-hydroxyisobutyrate dehydrogenase; TSAR; Tartronate semialdehyde reductase. (294 aa)
Dshi_3049RBS 7nt upstream PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase KEGG: acr:Acry_2399 NAD-dependent epimerase/dehydratase. (314 aa)
fabG1TIGRFAM: acetoacetyl-CoA reductase PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein KEGG: jan:Jann_0492 acetoacetyl-CoA reductase; 3-ketoacyl-acyl carrier protein reductase; 3-oxoacyl-[acyl-carrier-protein] reductase. (240 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (340 aa)
Dshi_3291Hypothetical protein; KEGG: jan:Jann_0273 NAD-dependent epimerase/dehydratase rde:RD1_0614 hypothetical protein. (290 aa)
serA1TIGRFAM: D-3-phosphoglycerate dehydrogenase PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding KEGG: sil:SPO3355 D-3-phosphoglycerate dehydrogenase. (531 aa)
Dshi_3394PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding KEGG: rde:RD1_3788 probable NADH-dependent dyhydrogenase. (336 aa)
gpsAPFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein KEGG: rsh:Rsph17029_0162 glycerol-3-phosphate dehydrogenase (NAD(P)(+)). (320 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (462 aa)
aroEShikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (278 aa)
maeBNADP-dependent malic enzyme; PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding KEGG: sit:TM1040_2877 malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., phosphate acetyltransferase; NADP-ME. (752 aa)
bchCTIGRFAM: chlorophyll synthesis pathway, BchC PFAM: Alcohol dehydrogenase GroES domain protein KEGG: jan:Jann_0180 chlorophyll synthesis pathway, BchC PMID: 17098896. (312 aa)
Dshi_3590Ubiquinone dependent NADH dehydrogenase; Pfam07993: NAD_binding_4 domain, COG0702 - Predicted nucleoside-diphosphate-sugar epimerases. (327 aa)
Your Current Organism:
Dinoroseobacter shibae
NCBI taxonomy Id: 398580
Other names: D. shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DFL 12, Dinoroseobacter shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DSM 16493, Dinoroseobacter shibae DSM 16493 = DFL 12, Jannaschia sp. DFL-12
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