STRINGSTRING
TGAM01_v200055 TGAM01_v200055 TGAM01_v209962 TGAM01_v209962 TGAM01_v205413 TGAM01_v205413 TGAM01_v204243 TGAM01_v204243 TGAM01_v201793 TGAM01_v201793 TGAM01_v200407 TGAM01_v200407
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TGAM01_v200055Uncharacterized protein. (1130 aa)
TGAM01_v209962Uncharacterized protein. (73 aa)
TGAM01_v205413Uncharacterized protein. (438 aa)
TGAM01_v204243Histone demethylase JARID1. (1746 aa)
TGAM01_v201793Peptidase family M20/M25/M40 protein. (901 aa)
TGAM01_v200407Chromo domain-containing protein. (218 aa)
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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