STRINGSTRING
TGAM01_v202897 TGAM01_v202897 TGAM01_v210097 TGAM01_v210097 TGAM01_v210191 TGAM01_v210191 TGAM01_v209692 TGAM01_v209692 TGAM01_v203085 TGAM01_v203085 TGAM01_v202903 TGAM01_v202903
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TGAM01_v202897Uncharacterized protein. (216 aa)
TGAM01_v210097Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (496 aa)
TGAM01_v210191Uncharacterized protein. (549 aa)
TGAM01_v209692Histone deacetylase HOS3. (1221 aa)
TGAM01_v203085PHD-type domain-containing protein. (1116 aa)
TGAM01_v202903HDAC_interact domain-containing protein. (1452 aa)
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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