16 items (Trichoderma gamsii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TGAM01_v208086	Uncharacterized protein. (224 aa)
	TGAM01_v208497	Uncharacterized protein. (286 aa)
	TGAM01_v210266	Uncharacterized protein. (443 aa)
	TGAM01_v209993	Uncharacterized protein. (751 aa)
	TGAM01_v209806	Uncharacterized protein. (504 aa)
	TGAM01_v208211	PNP_UDP_1 domain-containing protein. (388 aa)
	TGAM01_v208019	Uncharacterized protein. (652 aa)
	TGAM01_v207474	PNP_UDP_1 domain-containing protein. (1643 aa)
	TGAM01_v207576	Uncharacterized protein. (429 aa)
	TGAM01_v207458	PNP_UDP_1 domain-containing protein. (1756 aa)
	TGAM01_v207023	Uncharacterized protein. (566 aa)
	TGAM01_v206361	Uncharacterized protein. (450 aa)
	TGAM01_v205778	PNP_UDP_1 domain-containing protein. (884 aa)
	TGAM01_v202638	Uncharacterized protein. (659 aa)
	TGAM01_v201848	PNP_UDP_1 domain-containing protein. (334 aa)
	TGAM01_v200277	ANK_REP_REGION domain-containing protein. (548 aa)

Your Current Organism:

Trichoderma gamsii

NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TGAM01_v200277	TGAM01_v207576	A0A2P5A2U3	A0A2P4ZH72	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.401
TGAM01_v200277	TGAM01_v209806	A0A2P5A2U3	A0A2P4ZAN6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.476
TGAM01_v201848	TGAM01_v209806	A0A2P4ZZ69	A0A2P4ZAN6	PNP_UDP_1 domain-containing protein.	Uncharacterized protein.	0.493
TGAM01_v202638	TGAM01_v209806	A0A2P4ZWY7	A0A2P4ZAN6	Uncharacterized protein.	Uncharacterized protein.	0.482
TGAM01_v205778	TGAM01_v209806	A0A2P4ZMJ0	A0A2P4ZAN6	PNP_UDP_1 domain-containing protein.	Uncharacterized protein.	0.489
TGAM01_v206361	TGAM01_v207023	A0A2P4ZKM2	A0A2P4ZIA4	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v206361	TGAM01_v208019	A0A2P4ZKM2	A0A2P4ZFE5	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v206361	TGAM01_v208086	A0A2P4ZKM2	A0A0W7VDZ8	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v207023	TGAM01_v206361	A0A2P4ZIA4	A0A2P4ZKM2	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v207023	TGAM01_v208497	A0A2P4ZIA4	A0A0W7VL29	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v207023	TGAM01_v209993	A0A2P4ZIA4	A0A2P4ZA31	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v207023	TGAM01_v210266	A0A2P4ZIA4	A0A2P4Z9B1	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v207576	TGAM01_v200277	A0A2P4ZH72	A0A2P5A2U3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.401
TGAM01_v207576	TGAM01_v209806	A0A2P4ZH72	A0A2P4ZAN6	Uncharacterized protein.	Uncharacterized protein.	0.522
TGAM01_v208019	TGAM01_v206361	A0A2P4ZFE5	A0A2P4ZKM2	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v208019	TGAM01_v208497	A0A2P4ZFE5	A0A0W7VL29	Uncharacterized protein.	Uncharacterized protein.	0.664
TGAM01_v208019	TGAM01_v209993	A0A2P4ZFE5	A0A2P4ZA31	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v208019	TGAM01_v210266	A0A2P4ZFE5	A0A2P4Z9B1	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v208086	TGAM01_v206361	A0A0W7VDZ8	A0A2P4ZKM2	Uncharacterized protein.	Uncharacterized protein.	0.513
TGAM01_v208086	TGAM01_v208497	A0A0W7VDZ8	A0A0W7VL29	Uncharacterized protein.	Uncharacterized protein.	0.513

page 1 of 2

Server load: low (12%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Neighborhood

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About