STRINGSTRING
TGAM01_v207032 TGAM01_v207032 TGAM01_v207047 TGAM01_v207047 TGAM01_v206920 TGAM01_v206920 TGAM01_v206674 TGAM01_v206674 TGAM01_v206700 TGAM01_v206700 TGAM01_v206272 TGAM01_v206272 TGAM01_v206348 TGAM01_v206348 TGAM01_v206385 TGAM01_v206385 TGAM01_v206390 TGAM01_v206390 TGAM01_v206088 TGAM01_v206088 TGAM01_v206150 TGAM01_v206150 TGAM01_v205847 TGAM01_v205847 TGAM01_v205866 TGAM01_v205866 TGAM01_v205867 TGAM01_v205867 TGAM01_v205966 TGAM01_v205966 TGAM01_v205643 TGAM01_v205643 TGAM01_v205765 TGAM01_v205765 TGAM01_v205422 TGAM01_v205422 TGAM01_v205430 TGAM01_v205430 TGAM01_v205519 TGAM01_v205519 TGAM01_v205591 TGAM01_v205591 TGAM01_v205096 TGAM01_v205096 TGAM01_v205130 TGAM01_v205130 TGAM01_v204756 TGAM01_v204756 TGAM01_v204740 TGAM01_v204740 TGAM01_v204819 TGAM01_v204819 TGAM01_v204852 TGAM01_v204852 TGAM01_v204459 TGAM01_v204459 TGAM01_v204537 TGAM01_v204537 TGAM01_v204589 TGAM01_v204589 TGAM01_v204376 TGAM01_v204376 TGAM01_v203616 TGAM01_v203616 TGAM01_v203763 TGAM01_v203763 TGAM01_v203306 TGAM01_v203306 TGAM01_v203542 TGAM01_v203542 TGAM01_v207460 TGAM01_v207460 TGAM01_v210992 TGAM01_v210992 TGAM01_v210954 TGAM01_v210954 TGAM01_v205146 TGAM01_v205146 TGAM01_v208422 TGAM01_v208422 TGAM01_v200800 TGAM01_v200800 TGAM01_v209627 TGAM01_v209627 TGAM01_v209530 TGAM01_v209530 TGAM01_v207362 TGAM01_v207362 TGAM01_v201006 TGAM01_v201006 TGAM01_v200462 TGAM01_v200462 TGAM01_v207931 TGAM01_v207931 TGAM01_v207582 TGAM01_v207582 LSM5 LSM5 TGAM01_v204961 TGAM01_v204961 LSM1 LSM1 TGAM01_v205227 TGAM01_v205227 TGAM01_v206140 TGAM01_v206140 TGAM01_v204833 TGAM01_v204833 TGAM01_v204775 TGAM01_v204775 TGAM01_v205802 TGAM01_v205802 TGAM01_v205716 TGAM01_v205716 TGAM01_v205706 TGAM01_v205706 TGAM01_v208839 TGAM01_v208839 TGAM01_v208771 TGAM01_v208771 TGAM01_v200562 TGAM01_v200562 TGAM01_v210730 TGAM01_v210730 TGAM01_v200983 TGAM01_v200983 TGAM01_v210081 TGAM01_v210081 TGAM01_v210945 TGAM01_v210945 TGAM01_v204330 TGAM01_v204330 TGAM01_v204042 TGAM01_v204042 TGAM01_v205464 TGAM01_v205464 TGAM01_v204883 TGAM01_v204883 TGAM01_v211150 TGAM01_v211150 TGAM01_v211142 TGAM01_v211142 TGAM01_v211004 TGAM01_v211004 PAN3 PAN3 TGAM01_v210902 TGAM01_v210902 TGAM01_v210835 TGAM01_v210835 TGAM01_v210737 TGAM01_v210737 TGAM01_v210616 TGAM01_v210616 TGAM01_v210618 TGAM01_v210618 TGAM01_v210402 TGAM01_v210402 TGAM01_v210344 TGAM01_v210344 TGAM01_v210345 TGAM01_v210345 TGAM01_v210364 TGAM01_v210364 TGAM01_v210317 TGAM01_v210317 TGAM01_v210312 TGAM01_v210312 TGAM01_v210239 TGAM01_v210239 TGAM01_v210286 TGAM01_v210286 TGAM01_v210215 TGAM01_v210215 TGAM01_v210077 TGAM01_v210077 MCM7 MCM7 TGAM01_v210036 TGAM01_v210036 TGAM01_v209925 TGAM01_v209925 TGAM01_v209954 TGAM01_v209954 TGAM01_v209927 TGAM01_v209927 TGAM01_v209948 TGAM01_v209948 TGAM01_v209840 TGAM01_v209840 TGAM01_v209864 TGAM01_v209864 TGAM01_v209697 TGAM01_v209697 TGAM01_v209755 TGAM01_v209755 TGAM01_v209713 TGAM01_v209713 TGAM01_v209630 TGAM01_v209630 TGAM01_v209436 TGAM01_v209436 TGAM01_v209293 TGAM01_v209293 TGAM01_v209095 TGAM01_v209095 TGAM01_v208942 TGAM01_v208942 TGAM01_v208805 TGAM01_v208805 TGAM01_v208700 TGAM01_v208700 TGAM01_v208743 TGAM01_v208743 TGAM01_v208631 TGAM01_v208631 TGAM01_v208605 TGAM01_v208605 TGAM01_v208306 TGAM01_v208306 TGAM01_v208171 TGAM01_v208171 TGAM01_v208196 TGAM01_v208196 TGAM01_v208214 TGAM01_v208214 TGAM01_v208049 TGAM01_v208049 TGAM01_v207818 TGAM01_v207818 TGAM01_v207682 TGAM01_v207682 TGAM01_v207706 TGAM01_v207706 TGAM01_v207511 TGAM01_v207511 LSM4 LSM4 TGAM01_v207569 TGAM01_v207569 TGAM01_v207584 TGAM01_v207584 TGAM01_v207603 TGAM01_v207603 TGAM01_v207397 TGAM01_v207397 TGAM01_v207260 TGAM01_v207260 TGAM01_v207309 TGAM01_v207309 TGAM01_v203539 TGAM01_v203539 TGAM01_v203016 TGAM01_v203016 TGAM01_v203086 TGAM01_v203086 TGAM01_v203087 TGAM01_v203087 TGAM01_v203167 TGAM01_v203167 TGAM01_v203187 TGAM01_v203187 TGAM01_v202645 TGAM01_v202645 TGAM01_v202447 TGAM01_v202447 TGAM01_v202247 TGAM01_v202247 TGAM01_v202245 TGAM01_v202245 TGAM01_v201517 TGAM01_v201517 TGAM01_v201589 TGAM01_v201589 TGAM01_v201748 TGAM01_v201748 TGAM01_v201876 TGAM01_v201876 TGAM01_v201139 TGAM01_v201139 TGAM01_v201286 TGAM01_v201286 TGAM01_v200566 TGAM01_v200566 TGAM01_v200809 TGAM01_v200809 TGAM01_v200810 TGAM01_v200810 PAN2 PAN2 TGAM01_v200992 TGAM01_v200992 TGAM01_v200072 TGAM01_v200072
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TGAM01_v2070325'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1420 aa)
TGAM01_v207047DNA helicase; Belongs to the MCM family. (721 aa)
TGAM01_v206920Uncharacterized protein. (616 aa)
TGAM01_v206674Uncharacterized protein. (2278 aa)
TGAM01_v206700Uncharacterized protein. (476 aa)
TGAM01_v206272Nudix hydrolase domain-containing protein. (410 aa)
TGAM01_v206348Nuclear cap-binding protein subunit 2. (174 aa)
TGAM01_v206385C3H1-type domain-containing protein. (1124 aa)
TGAM01_v206390Uncharacterized protein. (886 aa)
TGAM01_v206088Stress-response A/B barrel domain-containing protein. (102 aa)
TGAM01_v206150Uncharacterized protein. (221 aa)
TGAM01_v205847Uncharacterized protein. (589 aa)
TGAM01_v205866RNA-dependent RNA polymerase. (1287 aa)
TGAM01_v205867ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (468 aa)
TGAM01_v205966Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (421 aa)
TGAM01_v205643AAA_12 domain-containing protein. (119 aa)
TGAM01_v205765Nudix hydrolase domain-containing protein. (693 aa)
TGAM01_v205422DNA helicase; Belongs to the MCM family. (883 aa)
TGAM01_v205430Uncharacterized protein. (1118 aa)
TGAM01_v205519Cell differentiation family protein. (425 aa)
TGAM01_v205591Tr-type G domain-containing protein. (820 aa)
TGAM01_v205096YTH domain-containing protein. (640 aa)
TGAM01_v205130Mitotic control protein dis3; Belongs to the RNR ribonuclease family. (986 aa)
TGAM01_v204756Uncharacterized protein. (235 aa)
TGAM01_v204740C2H2-type domain-containing protein. (474 aa)
TGAM01_v204819Uncharacterized protein. (749 aa)
TGAM01_v204852RNase_PH domain-containing protein. (337 aa)
TGAM01_v204459RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily. (1528 aa)
TGAM01_v204537Uncharacterized protein. (257 aa)
TGAM01_v204589Rtt106 domain-containing protein. (530 aa)
TGAM01_v204376RNB domain-containing protein. (1356 aa)
TGAM01_v203616Histone acetyltransferase type B catalytic subunit. (482 aa)
TGAM01_v203763WD_REPEATS_REGION domain-containing protein. (498 aa)
TGAM01_v203306Exosome complex component RRP4. (364 aa)
TGAM01_v203542Uncharacterized protein. (1080 aa)
TGAM01_v207460Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (499 aa)
TGAM01_v210992RNase_PH domain-containing protein. (247 aa)
TGAM01_v210954Uncharacterized protein. (172 aa)
TGAM01_v205146Mago-bind domain-containing protein. (202 aa)
TGAM01_v208422Uncharacterized protein. (179 aa)
TGAM01_v200800Cytosine-specific methyltransferase. (1275 aa)
TGAM01_v209627Uncharacterized protein. (245 aa)
TGAM01_v209530DNA-directed RNA polymerase II subunit RPB7. (171 aa)
TGAM01_v20736260S ribosomal protein L23. (179 aa)
TGAM01_v201006Uncharacterized protein. (2188 aa)
TGAM01_v200462Eukaryotic translation initiation factor 4E-2; Belongs to the eukaryotic initiation factor 4E family. (256 aa)
TGAM01_v207931Uncharacterized protein. (399 aa)
TGAM01_v207582DNA-directed RNA polymerase II subunit RPB4. (142 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
TGAM01_v204961RNase_PH domain-containing protein. (368 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (170 aa)
TGAM01_v205227RNase_PH domain-containing protein. (274 aa)
TGAM01_v20614060S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
TGAM01_v204833Uncharacterized protein. (293 aa)
TGAM01_v204775Uncharacterized protein. (497 aa)
TGAM01_v205802RING-box protein 1. (114 aa)
TGAM01_v205716Uncharacterized protein. (465 aa)
TGAM01_v205706Translation initiation factor 5. (425 aa)
TGAM01_v208839DNA damage-binding protein 1. (1161 aa)
TGAM01_v208771Non-specific serine/threonine protein kinase. (815 aa)
TGAM01_v200562Uncharacterized protein. (798 aa)
TGAM01_v210730WD_REPEATS_REGION domain-containing protein. (316 aa)
TGAM01_v200983Tr-type G domain-containing protein. (728 aa)
TGAM01_v210081TMF_TATA_bd domain-containing protein. (866 aa)
TGAM01_v210945Small nuclear ribonucleoprotein. (143 aa)
TGAM01_v204330tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (470 aa)
TGAM01_v204042PAT1 domain-containing protein. (844 aa)
TGAM01_v205464Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (181 aa)
TGAM01_v204883Uncharacterized protein. (339 aa)
TGAM01_v211150Regulator-nonsense transcripts 1. (1083 aa)
TGAM01_v211142Uncharacterized protein. (695 aa)
TGAM01_v211004C3H1-type domain-containing protein. (1963 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (674 aa)
TGAM01_v210902Stc1 domain-containing protein. (375 aa)
TGAM01_v210835Uncharacterized protein. (221 aa)
TGAM01_v210737Uncharacterized protein. (535 aa)
TGAM01_v210616RNase3 domain-containing protein. (419 aa)
TGAM01_v210618Meiotic coiled-coil protein 2. (762 aa)
TGAM01_v210402Helitron_like_N domain-containing protein. (865 aa)
TGAM01_v210344Uncharacterized protein. (867 aa)
TGAM01_v210345BIP4. (109 aa)
TGAM01_v210364C2H2-type domain-containing protein. (872 aa)
TGAM01_v210317AAA_12 domain-containing protein. (920 aa)
TGAM01_v210312Uncharacterized protein. (244 aa)
TGAM01_v210239Molecular chaperone HtpG. (388 aa)
TGAM01_v210286Endo/exonuclease/phosphatase domain-containing protein. (695 aa)
TGAM01_v210215PUM-HD domain-containing protein. (1046 aa)
TGAM01_v210077Uncharacterized protein. (499 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (811 aa)
TGAM01_v210036Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (736 aa)
TGAM01_v2099253'-5' exonuclease. (248 aa)
TGAM01_v209954RRM domain-containing protein. (687 aa)
TGAM01_v209927Uncharacterized protein. (288 aa)
TGAM01_v209948Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (569 aa)
TGAM01_v209840Uncharacterized protein. (1210 aa)
TGAM01_v209864PAP-associated domain-containing protein. (1048 aa)
TGAM01_v209697Uncharacterized protein. (471 aa)
TGAM01_v209755EST1_DNA_bind domain-containing protein. (758 aa)
TGAM01_v209713NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. (423 aa)
TGAM01_v209630Uncharacterized protein. (937 aa)
TGAM01_v209436Uncharacterized protein. (243 aa)
TGAM01_v209293RNP domain-containing protein. (515 aa)
TGAM01_v209095Uncharacterized protein. (1421 aa)
TGAM01_v208942Uncharacterized protein. (521 aa)
TGAM01_v208805NAD-dependent histone deacetylase SIR2. (531 aa)
TGAM01_v208700Uncharacterized protein. (213 aa)
TGAM01_v208743AAA domain-containing protein. (1756 aa)
TGAM01_v208631CCHC-type domain-containing protein. (617 aa)
TGAM01_v208605Uncharacterized protein. (1621 aa)
TGAM01_v208306RRM domain-containing protein. (650 aa)
TGAM01_v208171Stress-response A/B barrel domain-containing protein. (119 aa)
TGAM01_v208196Uncharacterized protein. (634 aa)
TGAM01_v208214Uncharacterized protein. (1642 aa)
TGAM01_v208049Chromo domain-containing protein. (289 aa)
TGAM01_v207818Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1518 aa)
TGAM01_v207682APH domain-containing protein. (301 aa)
TGAM01_v207706Deacetylase sirtuin-type domain-containing protein. (954 aa)
TGAM01_v207511B30.2/SPRY domain-containing protein. (551 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (155 aa)
TGAM01_v207569CBFD_NFYB_HMF domain-containing protein. (215 aa)
TGAM01_v207584PUM-HD domain-containing protein. (642 aa)
TGAM01_v207603CCR4-NOT transcription complex subunit 4. (1509 aa)
TGAM01_v207397Uncharacterized protein. (357 aa)
TGAM01_v207260Uncharacterized protein. (279 aa)
TGAM01_v207309Uncharacterized protein. (207 aa)
TGAM01_v203539AAA_12 domain-containing protein. (213 aa)
TGAM01_v203016Uncharacterized protein. (905 aa)
TGAM01_v203086Uncharacterized protein. (1147 aa)
TGAM01_v203087Non-specific serine/threonine protein kinase. (651 aa)
TGAM01_v203167Uncharacterized protein. (492 aa)
TGAM01_v203187Deacetylase sirtuin-type domain-containing protein. (610 aa)
TGAM01_v202645Uncharacterized protein. (636 aa)
TGAM01_v202447Chromo domain-containing protein. (267 aa)
TGAM01_v202247NTP_transf_9 domain-containing protein. (152 aa)
TGAM01_v202245Uncharacterized protein. (1282 aa)
TGAM01_v201517WD_REPEATS_REGION domain-containing protein. (422 aa)
TGAM01_v201589Uncharacterized protein. (1039 aa)
TGAM01_v201748Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (139 aa)
TGAM01_v201876RNA-dependent RNA polymerase. (1271 aa)
TGAM01_v201139PUM-HD domain-containing protein. (822 aa)
TGAM01_v201286RNA-dependent RNA polymerase. (1387 aa)
TGAM01_v200566S1 domain-containing protein. (208 aa)
TGAM01_v200809Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (667 aa)
TGAM01_v200810HRDC domain-containing protein. (816 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1137 aa)
TGAM01_v200992Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1111 aa)
TGAM01_v200072WD_REPEATS_REGION domain-containing protein. (470 aa)
Your Current Organism:
Trichoderma gamsii
NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09
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