Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PIF1 | TGAM01_v200145 | A0A2P4ZPZ5 | A0A2P5A2G2 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | DNA repair protein RAD50. | 0.641 |
| PIF1 | TGAM01_v200246 | A0A2P4ZPZ5 | A0A2P5A2Q3 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Chromosome transmission fidelity protein 1. | 0.464 |
| PIF1 | TGAM01_v201041 | A0A2P4ZPZ5 | A0A2P4ZZH0 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | ATP-dependent DNA helicase 2 subunit 2. | 0.620 |
| PIF1 | TGAM01_v201694 | A0A2P4ZPZ5 | A0A2P4ZYS0 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | RECA_2 domain-containing protein. | 0.483 |
| PIF1 | TGAM01_v202168 | A0A2P4ZPZ5 | A0A2P4ZXP4 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Uncharacterized protein. | 0.438 |
| PIF1 | TGAM01_v202431 | A0A2P4ZPZ5 | A0A2P4ZW98 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | SMC_N domain-containing protein. | 0.444 |
| PIF1 | TGAM01_v203277 | A0A2P4ZPZ5 | A0A2P4ZV44 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Fanconi anemia group M protein. | 0.551 |
| PIF1 | TGAM01_v207551 | A0A2P4ZPZ5 | A0A2P4ZH57 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | ATP-dependent DNA helicase 2 subunit 1. | 0.558 |
| PIF1 | TGAM01_v207552 | A0A2P4ZPZ5 | A0A2P4ZH55 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | SAP domain-containing protein. | 0.778 |
| PIF1 | TGAM01_v207924 | A0A2P4ZPZ5 | A0A2K0SY25 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Structural maintenance of chromosomes protein. | 0.427 |
| PIF1 | TGAM01_v209291 | A0A2P4ZPZ5 | A0A2P4ZC83 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | SMC_N domain-containing protein. | 0.438 |
| PIF1 | TGAM01_v210639 | A0A2P4ZPZ5 | A0A2P4Z841 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Uncharacterized protein. | 0.427 |
| PIF1 | TGAM01_v211033 | A0A2P4ZPZ5 | A0A2P4Z761 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Uncharacterized protein. | 0.401 |
| PIF1 | TGAM01_v211118 | A0A2P4ZPZ5 | A0A2P4Z6U7 | ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. | Helicase ATP-binding domain-containing protein. | 0.401 |
| PIM1 | TGAM01_v200089 | A0A2P4ZDQ6 | A0A2P5A2B5 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.401 |
| PIM1 | TGAM01_v200780 | A0A2P4ZDQ6 | A0A2P5A1B8 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | DUF2263 domain-containing protein. | 0.571 |
| PIM1 | TGAM01_v201131 | A0A2P4ZDQ6 | A0A2P4ZZP4 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | Stress protein ORP150. | 0.401 |
| PIM1 | TGAM01_v201799 | A0A2P4ZDQ6 | A0A0W7VN31 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | Heat shock protein SSC1; Belongs to the heat shock protein 70 family. | 0.520 |
| PIM1 | TGAM01_v203386 | A0A2P4ZDQ6 | A0A2P4ZTJ4 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | Mitochondrial chaperone BCS1. | 0.571 |
| PIM1 | TGAM01_v203947 | A0A2P4ZDQ6 | A0A0W7VCW0 | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | T-complex protein 1 subunit beta. | 0.620 |
page 1 of 141