36 items (Trichoderma gamsii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TGAM01_v200145	DNA repair protein RAD50. (1308 aa)
	TGAM01_v209417	ABM domain-containing protein. (104 aa)
	TGAM01_v206369	MAP kinase kinase PBS2. (644 aa)
	TGAM01_v200877	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (276 aa)
	TGAM01_v201867	Thioredoxin domain-containing protein. (180 aa)
	TGAM01_v204507	FMP21. (141 aa)
	TGAM01_v200236	Uncharacterized protein. (415 aa)
	TGAM01_v206335	STE/STE11 protein kinase. (903 aa)
	TGAM01_v200443	Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
	TGAM01_v202635	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	TGAM01_v204579	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (92 aa)
	TGAM01_v205183	UBIQUITIN_CONJUGAT_2 domain-containing protein. (161 aa)
	TGAM01_v200331	Uncharacterized protein. (185 aa)
	TGAM01_v205524	BZIP domain-containing protein. (301 aa)
	TGAM01_v202692	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (413 aa)
	TGAM01_v209307	Histone H2B; Belongs to the histone H2B family. (137 aa)
	TGAM01_v209285	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (355 aa)
	TGAM01_v201075	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily. (498 aa)
	TGAM01_v200055	Uncharacterized protein. (1130 aa)
	TGAM01_v210772	Uncharacterized protein. (300 aa)
	TGAM01_v210682	Uncharacterized protein. (405 aa)
	TGAM01_v209701	Uncharacterized protein. (605 aa)
	TGAM01_v209242	HUN domain-containing protein. (679 aa)
	TGAM01_v209308	Uncharacterized protein. (491 aa)
	TGAM01_v209148	Uncharacterized protein. (587 aa)
	TGAM01_v208718	Serine/threonine protein kinase. (1047 aa)
	TGAM01_v208382	Anaphase-promoting complex subunit 5. (813 aa)
	TGAM01_v208181	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (726 aa)
	TGAM01_v205413	Uncharacterized protein. (438 aa)
	TGAM01_v205369	TPR_REGION domain-containing protein. (871 aa)
	TGAM01_v204821	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3726 aa)
	TGAM01_v204029	Thioredoxin; Belongs to the thioredoxin family. (138 aa)
	TGAM01_v204172	Helicase SWR1. (1742 aa)
	TGAM01_v203518	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1052 aa)
	TGAM01_v203175	STE/STE7/MKK protein kinase. (349 aa)
	TGAM01_v200644	Telo_bind domain-containing protein. (684 aa)

Your Current Organism:

Trichoderma gamsii

NCBI taxonomy Id: 398673
Other names: BPI 872183, C.P.K. 2074, CBS 120075, CPK 2074, FMR 12636, G.J.S. 06-09, GJS 06-09, T. gamsii, Trichoderma gamsii Samuels & Druzhinina, 2006, Trichoderma sp. GJS 04-09

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TGAM01_v200055	TGAM01_v200145	A0A2K0TLG1	A0A2P5A2G2	Uncharacterized protein.	DNA repair protein RAD50.	0.400
TGAM01_v200055	TGAM01_v202635	A0A2K0TLG1	A0A0W7VQQ8	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.588
TGAM01_v200055	TGAM01_v204172	A0A2K0TLG1	A0A2P4ZSJ7	Uncharacterized protein.	Helicase SWR1.	0.413
TGAM01_v200055	TGAM01_v204821	A0A2K0TLG1	A0A2P4ZPW7	Uncharacterized protein.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.429
TGAM01_v200055	TGAM01_v205369	A0A2K0TLG1	A0A2P4ZNR0	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.615
TGAM01_v200055	TGAM01_v205413	A0A2K0TLG1	A0A2P4ZMM5	Uncharacterized protein.	Uncharacterized protein.	0.999
TGAM01_v200055	TGAM01_v205524	A0A2K0TLG1	A0A0W7VWX9	Uncharacterized protein.	BZIP domain-containing protein.	0.588
TGAM01_v200055	TGAM01_v208181	A0A2K0TLG1	A0A2P4ZF57	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.410
TGAM01_v200055	TGAM01_v208382	A0A2K0TLG1	A0A2P4ZEI3	Uncharacterized protein.	Anaphase-promoting complex subunit 5.	0.535
TGAM01_v200055	TGAM01_v209307	A0A2K0TLG1	A0A0W7VZ36	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.900
TGAM01_v200055	TGAM01_v209308	A0A2K0TLG1	A0A2P4ZC52	Uncharacterized protein.	Uncharacterized protein.	0.847
TGAM01_v200055	TGAM01_v210682	A0A2K0TLG1	A0A2P4Z853	Uncharacterized protein.	Uncharacterized protein.	0.825
TGAM01_v200145	TGAM01_v200055	A0A2P5A2G2	A0A2K0TLG1	DNA repair protein RAD50.	Uncharacterized protein.	0.400
TGAM01_v200145	TGAM01_v200443	A0A2P5A2G2	A0A0W7VMR7	DNA repair protein RAD50.	Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.	0.444
TGAM01_v200145	TGAM01_v200644	A0A2P5A2G2	A0A2P5A0Y8	DNA repair protein RAD50.	Telo_bind domain-containing protein.	0.626
TGAM01_v200145	TGAM01_v204821	A0A2P5A2G2	A0A2P4ZPW7	DNA repair protein RAD50.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.980
TGAM01_v200145	TGAM01_v205183	A0A2P5A2G2	A0A0W7VVW0	DNA repair protein RAD50.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.550
TGAM01_v200145	TGAM01_v208181	A0A2P5A2G2	A0A2P4ZF57	DNA repair protein RAD50.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.999
TGAM01_v200145	TGAM01_v209307	A0A2P5A2G2	A0A0W7VZ36	DNA repair protein RAD50.	Histone H2B; Belongs to the histone H2B family.	0.659
TGAM01_v200145	TGAM01_v209308	A0A2P5A2G2	A0A2P4ZC52	DNA repair protein RAD50.	Uncharacterized protein.	0.639

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