Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SLX4 | TGAM01_v200487 | A0A2P5A3G9 | A0A2K0TRI6 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Uncharacterized protein. | 0.451 |
| SLX4 | TGAM01_v201850 | A0A2P5A3G9 | A0A2P4ZZB2 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Wiskott-Aldrich syndrome protein. | 0.942 |
| SLX4 | TGAM01_v203029 | A0A2P5A3G9 | A0A0W7VY02 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | 0.452 |
| SLX4 | TGAM01_v203860 | A0A2P5A3G9 | A0A2P4ZT64 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Arp2/3 complex. | 0.987 |
| SLX4 | TGAM01_v205840 | A0A2P5A3G9 | A0A2P4ZLJ0 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit. | 0.994 |
| SLX4 | TGAM01_v207191 | A0A2P5A3G9 | A0A2P4ZHV7 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. | 0.981 |
| SLX4 | TGAM01_v207225 | A0A2P5A3G9 | A0A0W7VUJ9 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | WH2 domain-containing protein. | 0.643 |
| SLX4 | TGAM01_v207245 | A0A2P5A3G9 | A0A2K0TM75 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | 0.454 |
| SLX4 | TGAM01_v209524 | A0A2P5A3G9 | A0A0W7VHM9 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | 0.612 |
| SLX4 | TGAM01_v210038 | A0A2P5A3G9 | A0A2P4Z9Y3 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Ras-like protein Rab-11B. | 0.473 |
| SLX4 | TGAM01_v210186 | A0A2P5A3G9 | A0A0W7VGF7 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. | 0.986 |
| TGAM01_v200057 | TGAM01_v201749 | A0A2P5A271 | A0A0W7VNG9 | Uncharacterized protein. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.522 |
| TGAM01_v200057 | TGAM01_v203860 | A0A2P5A271 | A0A2P4ZT64 | Uncharacterized protein. | Arp2/3 complex. | 0.509 |
| TGAM01_v200057 | TGAM01_v205840 | A0A2P5A271 | A0A2P4ZLJ0 | Uncharacterized protein. | tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit. | 0.564 |
| TGAM01_v200057 | TGAM01_v206284 | A0A2P5A271 | A0A0W7VJK5 | Uncharacterized protein. | Cell division control protein 42. | 0.490 |
| TGAM01_v200057 | TGAM01_v207245 | A0A2P5A271 | A0A2K0TM75 | Uncharacterized protein. | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | 0.664 |
| TGAM01_v200057 | TGAM01_v209524 | A0A2P5A271 | A0A0W7VHM9 | Uncharacterized protein. | F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | 0.976 |
| TGAM01_v200057 | TGAM01_v209833 | A0A2P5A271 | A0A2P4ZAD6 | Uncharacterized protein. | SEC7 domain-containing protein. | 0.648 |
| TGAM01_v200057 | TGAM01_v210038 | A0A2P5A271 | A0A2P4Z9Y3 | Uncharacterized protein. | Ras-like protein Rab-11B. | 0.418 |
| TGAM01_v200057 | TGAM01_v210186 | A0A2P5A271 | A0A0W7VGF7 | Uncharacterized protein. | Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. | 0.416 |
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