STRINGSTRING
Glov_1501 Glov_1501 Glov_1768 Glov_1768 Glov_2600 Glov_2600 Glov_2946 Glov_2946 Glov_3249 Glov_3249
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Glov_1501KEGG: aav:Aave_0959 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase. (614 aa)
Glov_1768PFAM: aminotransferase class I and II; KEGG: gsu:GSU1242 aspartate aminotransferase. (399 aa)
Glov_2600PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_1046 aspartate aminotransferase. (397 aa)
Glov_2946PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1708 acetyltransferase. (150 aa)
Glov_3249PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_0622 aminotransferase. (434 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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