STRINGSTRING
Glov_0570 Glov_0570 Glov_0571 Glov_0571 Glov_0572 Glov_0572 Glov_0652 Glov_0652 Glov_1088 Glov_1088 birA birA Glov_1328 Glov_1328 Glov_1329 Glov_1329 Glov_1378 Glov_1378 Glov_1817 Glov_1817 Glov_1818 Glov_1818 Glov_1819 Glov_1819 Glov_1820 Glov_1820 Glov_2407 Glov_2407 Glov_2549 Glov_2549 Glov_2905 Glov_2905 Glov_2995 Glov_2995 Glov_3258 Glov_3258 Glov_3259 Glov_3259 Glov_3260 Glov_3260 Glov_3261 Glov_3261 Glov_3262 Glov_3262 Glov_3416 Glov_3416
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Glov_0570PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gme:Gmet_2255 hypothetical protein. (655 aa)
Glov_0571Electron transfer flavoprotein alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: gme:Gmet_2257 electron transfer flavoprotein, alpha subunit. (443 aa)
Glov_0572PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gur:Gura_1211 electron transfer flavoprotein beta-subunit. (271 aa)
Glov_0652PFAM: MaoC domain protein dehydratase; KEGG: gme:Gmet_0180 MaoC-like dehydratase. (158 aa)
Glov_1088TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU2637 alcohol dehydrogenase, zinc-containing. (328 aa)
birAbiotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (328 aa)
Glov_1328PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gsu:GSU1451 3-hydroxyisobutyrate dehydrogenase family protein. (288 aa)
Glov_1329KEGG: gur:Gura_0734 acetyl-CoA acetyltransferase-like protein. (532 aa)
Glov_1378PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gur:Gura_3534 methylmalonyl-CoA decarboxylase. (260 aa)
Glov_1817Methylmalonyl-CoA carboxytransferase; PFAM: carboxyl transferase; KEGG: ote:Oter_3307 propionyl-CoA carboxylase. (517 aa)
Glov_1818KEGG: rru:Rru_A3674 hypothetical protein. (136 aa)
Glov_1819PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: tko:TK1624 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit. (133 aa)
Glov_1820KEGG: rru:Rru_A3673 glutaconyl-CoA decarboxylase; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit. (376 aa)
Glov_2407PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dra:DR_1068 3-hydroxybutyryl-CoA dehydrogenase. (285 aa)
Glov_2549Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1149 aa)
Glov_2905PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gsu:GSU1377 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
Glov_2995TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU0771 alcohol dehydrogenase, zinc-containing. (331 aa)
Glov_3258TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0655 glyoxalase/bleomycin resistance protein/dioxygenase. (134 aa)
Glov_3259TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: dar:Daro_4005 arginine/ornithine transport system ATPase. (322 aa)
Glov_3260KEGG: pla:Plav_1702 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein. (713 aa)
Glov_3261PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: gur:Gura_0652 biotin/lipoyl attachment domain-containing protein. (965 aa)
Glov_3262Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: gur:Gura_0651 propionyl-CoA carboxylase. (574 aa)
Glov_3416PFAM: AMP-dependent synthetase and ligase; KEGG: gme:Gmet_0256 acyl-CoA synthetase. (545 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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