STRINGSTRING
Glov_0713 Glov_0713 Glov_0714 Glov_0714 Glov_0739 Glov_0739 Glov_0740 Glov_0740 Glov_2021 Glov_2021 Glov_2022 Glov_2022
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Glov_0713PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1038 ATPase. (363 aa)
Glov_0714TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; KEGG: pth:PTH_2331 ABC-type amino acid transport/signal transduction system. (755 aa)
Glov_0739KEGG: plt:Plut_1037 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3. (515 aa)
Glov_0740KEGG: cph:Cpha266_1178 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like. (261 aa)
Glov_2021PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1038 ATPase. (363 aa)
Glov_2022KEGG: pth:PTH_2331 ABC-type amino acid transport/signal transduction system; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor. (748 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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